Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01778 ATGGGATCCTTTAATCACTATGTGATTGTTAAGTTCAAGGATGGTGTTGCAGTTGAAGAACTCATTCTAGGGTTGGAGAAGATGGTATCTGGAATTGATCAAGTCAAATCCTTTGAATGGGGAAAGGACATTGAAAGCCATGAAATGCTAAGACAAGGATTCACTCATGTTTTCTTGATGGCATTCAATGGAAAAGAGGAGTTCAATGCATTTCAGACTCATCCCAATCATGTTGAGTTCTCAGGAGTGTTTTCACCAGCTGTTGAGAAGATTGTGGTGCTGGATTTTCCATCTAAGCTTGTCAAAGCACCAGCATGA 318 0.4025 MGSFNHYVIVKFKDGVAVEELILGLEKMVSGIDQVKSFEWGKDIESHEMLRQGFTHVFLMAFNGKEEFNAFQTHPNHVEFSGVFSPAVEKIVVLDFPSKLVKAPA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01778 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Viun11g01778 105 SUPERFAMILY Dimeric alpha+beta barrel 2 97 IPR011008 -
Viun11g01778 105 PANTHER - 3 99 IPR044662 -
Viun11g01778 105 Gene3D - 2 105 - -
Viun11g01778 105 SMART Dabb_2 4 98 IPR013097 -
Viun11g01778 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01778 Viun-Chr11 33789085 33790502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01778 - - vra:106755810 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03251 5 43184713 43185835 Viun11g01778 11 33789085 33790502 PCT