Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03205 ATGACCGAGGTCCTCCTCTCCCCACCCCATTTTCCATCTTCTTCATCACCAACAACAACAAAGACAACCTCAACCACAACAAACTCATCTCCTTCTCCTTCTTCTTCCTCTTCATTCTCTCGCAATGCCTTTCTCCGACCACACCTCTCTCTCTTGGCTCTTCTCTTGACCCTTTTCCGGAAATCCTTCCTTCCCCGCAAAACCATCTCCTCCGTCATGGACATAGGCTCACCAACTAACGTACGCCATGTTGCTCATGTCACCTTTGATAGGTTCAACGGTTTCCTGGGTTTGCCTGTTGAGTTTGAACCTGAAGTCCCCAGAAGACCTCCTAGTGCTAGTGCATCTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTGTCGTATGACTCCAGAGGGAACAGTGTGCCAACTATTCTGCTGTTGATGCAAAGGCATCTGTATGCTCAAGGAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAACGCAGACAATGGTCAAGCGGAGCATGTCAGAGATCAATTGAATATGGGAGTGGTTCCAGAAGGCATTGATGTACATTGTTTGGCAGGGCTAATTAAGGCTTGGTTTAGGGAACTTCCTACGGGCATTTTGGATTCATTATCACCGGAGCAGGTTATGCAATGCCAAACAGAGGAGGAATGTGCTGAAATAGTGAGACATCTACCTCATACTGAAGCTTCCCTCTTGGACTGGGCCATCAATCTGATGACTGATGTTGTTCAACATGAACATGTTAATAAGATGAATGCACGTAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGACCCAATATCTGCACTGATGTATGCAGTTCAAGTAATGAACTTCTTGAAGACACTCGTATTAAGAACACTGCGGGAAAGAAAGGATTCTGTTGTAGAATCTAATCCTAGATTTTATGCAGAACCTTCTGATGGTAATGGAAGCCAAAGACTTTTGGAGTCCCTCCAGGAAGATACTCATGCAGAAAATGAAGTGTCTCAGGGAAACATTGTTTTAGAGAAAACTGGCTTAGAGTGTTCTCCAGAATCAGTCCAAAACAACTCAACTGAAGGAGAATCTGTCACTCTGACAAACTCTTGTGAGAATCTTGTTAGCAATGAGGAATTGTATTGTGAGTTTCCACCCGTAGGAAACATGGGAAAGGGTAAAAGTGGTCAATCAAGTAAATCAAATGGTAGAAAAGAGTCTAAAAAGACTAGAAGCATCCTCCCATAA 1254 0.4394 MTEVLLSPPHFPSSSSPTTTKTTSTTTNSSPSPSSSSSFSRNAFLRPHLSLLALLLTLFRKSFLPRKTISSVMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASASVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINADNGQAEHVRDQLNMGVVPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCQTEEECAEIVRHLPHTEASLLDWAINLMTDVVQHEHVNKMNARNIAMVFAPNMTQMADPISALMYAVQVMNFLKTLVLRTLRERKDSVVESNPRFYAEPSDGNGSQRLLESLQEDTHAENEVSQGNIVLEKTGLECSPESVQNNSTEGESVTLTNSCENLVSNEELYCEFPPVGNMGKGKSGQSSKSNGRKESKKTRSILP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03205 417 PANTHER MKIAA1688 PROTEIN 13 411 IPR044785 GO:0005096
Viun5g03205 417 CDD CRIB 73 113 - -
Viun5g03205 417 CDD RhoGAP 137 292 - -
Viun5g03205 417 Pfam RhoGAP domain 137 271 IPR000198 GO:0007165
Viun5g03205 417 SMART RhoGAP_3 134 297 IPR000198 GO:0007165
Viun5g03205 417 Gene3D CRIB domain 71 105 IPR036936 -
Viun5g03205 417 ProSiteProfiles CRIB domain profile. 75 88 IPR000095 -
Viun5g03205 417 Gene3D Rho GTPase activation protein 108 304 IPR008936 -
Viun5g03205 417 SUPERFAMILY GTPase activation domain, GAP 115 293 IPR008936 -
Viun5g03205 417 SMART PBD_5 75 109 IPR000095 -
Viun5g03205 417 MobiDBLite consensus disorder prediction 387 417 - -
Viun5g03205 417 MobiDBLite consensus disorder prediction 401 417 - -
Viun5g03205 417 ProSiteProfiles Rho GTPase-activating proteins domain profile. 120 305 IPR000198 GO:0007165
Viun5g03205 417 Pfam P21-Rho-binding domain 74 101 IPR000095 -
Viun5g03205 417 MobiDBLite consensus disorder prediction 7 40 - -
Viun5g03205 417 FunFam Rho GTPase-activating protein 5 105 298 - -
Viun5g03205 417 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03205 Viun-Chr5 42882730 42886196 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03205 - K20642 gmx:100776004 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03205 5 42882730 42886196 Viun11g01716 11 33334078 33337536 PCT