Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03177 ATGAAACATTCTCAACATGCTGAATCCAACACACACCTCTCTGCATATTCACATTTAGTTATACCAACCAACGCCACCATGACCAAGGACTGCGGCCACCACAACGAGGAGCGGCAGAAGCTCCTCCGCCGAGTATTCGCCGCCGTCCTCGGCTTCATCTTCCTCATCCTCCTCGTAATCTTCCTCATCTGGATCATCCTCCGCCCAACCAAACCCCGTTTCATCCTCCAAGACGCCACCGTCTACGCATTCAACCTCTCCTCCAGCGGCGCCATCCCCTCCCCCACCGCCCCCACCCCCAACACTCTAACCCTCACCATGCAGGTCACTCTCTCCGCCTTCAACCCCAACCACCGCATCGGCGTCTACTACACCAAACTCGACGCCTACGCCTCCTACCGCGGCCAGCAAGTCTCCCTCGCCACCGCCCTCCCCCCCACCTACCAGGGCCACCGCGACACCGCCGTCTGGTCCCCCTTCCTCTACGGCACCGCCGTCCCCGTCTCCCCCTTCATGCTCCAGATTCTCCAGCAGGACAAAACCTCCGGAGGAGTGCTGGTCAACGTCAAAGTCAACGGCAGAGTGAAGTGGAAAGTGGGGACTTGGGTCTCCGGAAGGTACCATATTAACGTGAACTGCCCCGCGTATATCAGACTCGCCGGCGACGATGATGACGCCATCGGGGTAGCCGCTCCGGCGGTGAAGTTTCAGCTTTTCCAAAGTTGCATTGTTGATGTTTAG 741 0.587 MKHSQHAESNTHLSAYSHLVIPTNATMTKDCGHHNEERQKLLRRVFAAVLGFIFLILLVIFLIWIILRPTKPRFILQDATVYAFNLSSSGAIPSPTAPTPNTLTLTMQVTLSAFNPNHRIGVYYTKLDAYASYRGQQVSLATALPPTYQGHRDTAVWSPFLYGTAVPVSPFMLQILQQDKTSGGVLVNVKVNGRVKWKVGTWVSGRYHINVNCPAYIRLAGDDDDAIGVAAPAVKFQLFQSCIVDV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03177 246 PANTHER OS05G0367900 PROTEIN 43 228 IPR044839 GO:0098542
Viun5g03177 246 Pfam Late embryogenesis abundant protein 110 213 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03177 Viun-Chr5 42697637 42698574 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03177 - - pvu:PHAVU_005G120900g 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03177 5 42697637 42698574 Viun5g03177 5 42697637 42698574 ECH
Viun5g03177 5 42697637 42698574 Viun11g01671 11 33011956 33012841 PCT