Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01671 ATGTCCACCAAGGACTGCGGCCACCACCACTCTTCGAGCCGCCGTCTCCTCCGCCTCATTCTCATCGGCGTCGCCGCCTTCATCCTCCTTATCCTCTTCCTTGTCTTCCTCATATGGGTCATCCTCCGCCCAACCAAACCACGCTTCACGCTCCAAGACGCCACCCTCTTCACCTTCAACCTCTCTTCCCCCATCCCCAACACCCTCTCCCTCACCATGCAGGTCAGCCTCTCCGCCCACAACCCCAACTCCCGCATCGGCGTTTACTACCACGCGCTCCGCCTCCACGCCTCCTACCGTAGCCAGCAGATCTCCCTCCCCACCGCCCTCCCCGACACCTACCAGGGCCACCACGACTTCACCGTCTGGTCACCCTTCCTCTACGGTAACACCGTCCCCGTCGCGCCGTTTGTTCTCGCCTCCCTGCAGCAGGACCAGAATGCCGGCACCGTTATGGTCAACGTTAAGATCAACGGGAGGGTCAAGTGGAAGGTTGGAACTTGGGTCTCTGGAAGGTACCACATTTATGTTAACTGTCCCGCGTATATTAGCTTCGCCGGAGATCGGAGCAATGCCGCAGGAGTGAAGTTCCACCTCTTGCAAAGTTGCAGTGTTGATGTGTAG 624 0.5897 MSTKDCGHHHSSSRRLLRLILIGVAAFILLILFLVFLIWVILRPTKPRFTLQDATLFTFNLSSPIPNTLSLTMQVSLSAHNPNSRIGVYYHALRLHASYRSQQISLPTALPDTYQGHHDFTVWSPFLYGNTVPVAPFVLASLQQDQNAGTVMVNVKINGRVKWKVGTWVSGRYHIYVNCPAYISFAGDRSNAAGVKFHLLQSCSVDV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01671 207 Pfam Late embryogenesis abundant protein 77 179 IPR004864 -
Viun11g01671 207 PANTHER OS05G0367900 PROTEIN 19 205 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01671 Viun-Chr11 33011956 33012841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01671 9 179 EF-hand Containing Proteins AT5G21130 22.807 6.61e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01671 - - gmx:100812905 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03177 5 42697637 42698574 Viun11g01671 11 33011956 33012841 PCT