Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03165 ATGGAGAACCCAGGTTGCACTTGTACATGGCGAACCATGTACGAGAAACCACGAACCATGTTAGTTAACTTCACAAACATGGTTGTAAAACTCGGAAAAGATGACCCCAGAAGGATTATTCACTCCTTTAAGTTCGGATTCGCACTGGTATTAATCTCTATTTTGCAGTATTTTCGTCCCTCCTTCTATGTTCTTGGTGACAACATAATGTGGGCCGTTATCACTGTCGTTCTTGTCCTAGAATTTTCCGTGGGTGCAACGCTCGGAAAAGGTTTAAACAGGGTGTTGGCAACGGCGTTTGCCGGTGGTCTTGCCGTTGCTCTCCGCACAATAGCGAGTTTTTTTGGAGATAAGGGACAGGCGTTTGATTTCACAGCTGGAACGGTGTCGTTTATGAGATTTTCCCCGCGACTGAAAGCGAAGTATGAATATGGGATGATTATTTTCATTTTGACCTTTTGTTTAGTCGCTCTTTCTGAGAGCAGTGAGAATGAACTGTTGGAAGTTGCACAAGAGAGGTTATTAACGATCATAATTGGGACTTGCATTGCTATTACGGTTTGTATTTGTGTATGCCCCGTTTGGATTGGACAGGATCTTCACAATCAAATTGCTTCCAATGTTGTAAAAATCGCCGACTTTTTGGAAGGATTTAGAGATGAATACTTCAACAATTTAGAGAACACAGCAGAAGAAGTCGAGGAGGATGATAAGTCATTTCTCCACAAATATGAAAGTATCCTATCTTCAAAAATTAATGAAGAAACAATGGCTGTTTTGGCGAGATGGGAACCTCGTCATGGCAGGTTCAGATTTCGCCATCCCTGGAAGCAATACTTGAAGATCGGAAACCAAATTCGGTTGTGTGCTTACAAAATTAAAGCTCTCAGTGTCCTCCTCCTTCGTTCTGATCAAGATTGA 921 0.4202 MENPGCTCTWRTMYEKPRTMLVNFTNMVVKLGKDDPRRIIHSFKFGFALVLISILQYFRPSFYVLGDNIMWAVITVVLVLEFSVGATLGKGLNRVLATAFAGGLAVALRTIASFFGDKGQAFDFTAGTVSFMRFSPRLKAKYEYGMIIFILTFCLVALSESSENELLEVAQERLLTIIIGTCIAITVCICVCPVWIGQDLHNQIASNVVKIADFLEGFRDEYFNNLENTAEEVEEDDKSFLHKYESILSSKINEETMAVLARWEPRHGRFRFRHPWKQYLKIGNQIRLCAYKIKALSVLLLRSDQD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03165 306 Pfam Aluminium activated malate transporter 30 301 IPR020966 GO:0015743
Viun5g03165 306 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 21 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03165 Viun-Chr5 42614558 42616192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03165 30 305 Miscellaneous Gene Families AT2G27240 50.177 7.56e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03165 K25841 - gmx:100786663 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03165 5 42614558 42616192 Viun5g03165 5 42614558 42616192 ECH
Viun5g03165 5 42614558 42616192 Viun11g01663 11 32933226 32935779 PCT