Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01663 ATGTCATCTCCAAACACAAACCAGGAGAAATCAGGAGTGGTTGGTCGAGTATTGGCCTTGCCACAAGTTCTTAAGAAGAAGGTGTTGGGAATTTGTAGATTAACAAAAGAGATAGCCCAAGATGATCCTAGAAAAGTTATTCATTCACTAAAAGTGGGGCTTGCAATCTCACTGGTTTCTCTTTTCTATTACTATCAACCACTATATGAGAACTTTGGTCTATCAGCAATGTGGGCTGTGATGACTGTAGTGGTAGTTTTTGAGTACACAGTCGGAGCCACTTTAGGAAAAGGTTTGAATAGGACAATTGCAACATTGGCAGCTGGTGCTCTTGGTGTTGGTGCTCATTACTTAGCCAGCCTTTCTGGAGCAACAGGGGAACCAATATTGATTGGTGCATTTGTCTTTGTGCAAGCTGCCATAGCATCGTTTATAAGGTTTTTTCCGAAGGTGAAGGCAAGATATGATTATGGGATGCTTATATTCATCTTGACATTCTCTTTGATATCCGTGTCTGGTTTTCGAGAAGTTGAAGTGTTGGAAATGGCACACAAGAGGCTTTCAACCATATTCATAGGGGGTTCAGCTTGTGTGATGATTTCCATTTTTGTTTGCCCTGTGTGGGCTGGTGAAGAGTTTCACTATTCCATTGCTCACAAGCTCGAAATACTTGGCGATTTCTTGGAAGCTTTTGTACATGAATACTTTAACCAACCACAAGAAGGAGAATCTGAAGACAGCAAAGGAGATTCTAAAGACAAATCATTTTTGGAAGGTTATAAAAAGGTTCTCAATTCTAAAAGCATAGATGACTCTTTGGCAAATTTTGCAAAATGGGAGCCAGGTCATGGAAAGTTTAGATTTCGTCACCCTTGGGACCTATACCTCAAGATTGGTGCTCTTTCTCGCCAATGTGCATATCGAATGGAAGCTCTAGATGCACACATTAATTCAGATATCAAAGGGTCCCAGGATTTTCGTTCCACCATCCAAGAGTTATGCTCAGAAATGAGTTTGGAATCTAGCAAAGCCTTTAAGGAACTAGGATCATCGATTAGAACAATGACTAGGCCTTCTTCTTCAGACACACATGTTGCAAACGCAAAAGCTGCATTGAAGAGCCTCAAGTCATTGCTCCAATCATGTTCAAGGAAAGAAACTGACCTTTTATCACTCATACCAGCTGCAACAGTGGCTTCACTACTGATTGATATCGTGGAAATCACAGAGAAAATAGCAGATTCGGTGAATAATCTTGCCACCCTCACAGGTTTTGAGGTTGTAGATACAGATAAATCACCTAAAGTACCATCACAATCTTCACACTGTGAATGTGATGAAGCAGTTCCCAAAACTGATAATCTCCAAGTCGTTATTCTAATTGAGGAGTCAGCACTAGCTGTGTCAGATAATGAAAAATCAAACGTAGTTTGA 1434 0.4052 MSSPNTNQEKSGVVGRVLALPQVLKKKVLGICRLTKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTIATLAAGALGVGAHYLASLSGATGEPILIGAFVFVQAAIASFIRFFPKVKARYDYGMLIFILTFSLISVSGFREVEVLEMAHKRLSTIFIGGSACVMISIFVCPVWAGEEFHYSIAHKLEILGDFLEAFVHEYFNQPQEGESEDSKGDSKDKSFLEGYKKVLNSKSIDDSLANFAKWEPGHGKFRFRHPWDLYLKIGALSRQCAYRMEALDAHINSDIKGSQDFRSTIQELCSEMSLESSKAFKELGSSIRTMTRPSSSDTHVANAKAALKSLKSLLQSCSRKETDLLSLIPAATVASLLIDIVEITEKIADSVNNLATLTGFEVVDTDKSPKVPSQSSHCECDEAVPKTDNLQVVILIEESALAVSDNEKSNVV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01663 477 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 24 430 - -
Viun11g01663 477 Coils Coil 365 385 - -
Viun11g01663 477 Pfam Aluminium activated malate transporter 37 420 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01663 Viun-Chr11 32933226 32935779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01663 26 426 Miscellaneous Gene Families AT2G27240 59.102 1.04e-170 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01663 K25841 - gmx:100816113 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03165 5 42614558 42616192 Viun11g01663 11 32933226 32935779 PCT