Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03002 ATGGCAGGCATGGGCAACAATGAGATTTCAACACGGCTAGAGGGAAAATCTGCTGCAATAGTGGTTTGTTGGCTTCTCGGAAATGGATGTCTTTTTTCATGGAATAGTATGCTGACAATAGAAGATTACTACGTTAACTTGTTTCCAAAATATCACCCCTCTAGGGTTCTTACACTTGTATATCAGCCATTTGCTGTTGGAACACTTGCAATACTAGCGTATAATGAGGCAAAAATCAATACACGAATTCGGAATATGTTTGGATATATACTTTTTTTCATAAGCACGTTGCTGGTGTTAATTGTGAATTCTGCAGCATCTGGTGAAGGAGGGCTTGGAATATTCCTTGCTATATGTGCACTTAGTGGTGCCTTTGGAGTAGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAGTTCATTCAGTCATTCCTTGCTGGTTTGGCAGCATCTGGTGTATTAACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGATCATTCTAGTGACGGTCTCCGCAAAGGAGCAATTCTTTTCTTTGCCATATCAACATTCTTTGAGCTCCTATGCGTTATTCTCTATGCATTTATTTTTCCTAAACTACCAATTGTGAAGTACTACCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTATCAGCTGACCTTGCAGCAGGTGGCATCCGGACATTACCTGGAACAGACGAGGAAAATACAAAAGATCCAGAGCGGAAGGGAAACAAGCAATTGTTATCGGAAAACATTGATTATGCATTTGATATGTTCCTAATTTATGTGCTGACACTGTCTATTTTCCCTGGATTCCTCTCAGAAGATACTGGATCACATAGTTTGGGCACATGGTATGCTCTCGTCTTAATTGCTATGTATAATGTGTGCGATCTGATTGGAAGATACATTCCACTCATCAAATGCTTGAAATTGGAGTCCCGAAAGATGATCACAATAGCTACCGTTAGCCGTTTCATACTAATTCCAGCATTTTATTTCACCGCAAAGTTTGGTGACCAAGGTTGGATGATATTGTTAACATCCTTCTTGGGGCTATCCAATGGTTATCTCACTGTGTGTGTCCTAACATCTGCACCAAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACATATTGGTGTTGTTTCTTGTTGGAGGAATCTTTGCAGGAGTAGTACTCGACTGGCTATGGTTGATAGGTAAAGGATGGTGA 1254 0.4107 MAGMGNNEISTRLEGKSAAIVVCWLLGNGCLFSWNSMLTIEDYYVNLFPKYHPSRVLTLVYQPFAVGTLAILAYNEAKINTRIRNMFGYILFFISTLLVLIVNSAASGEGGLGIFLAICALSGAFGVADAHVQGGMVGDLSYMQPEFIQSFLAGLAASGVLTSALRLITKAAFDHSSDGLRKGAILFFAISTFFELLCVILYAFIFPKLPIVKYYRSKAASEGSKTVSADLAAGGIRTLPGTDEENTKDPERKGNKQLLSENIDYAFDMFLIYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVCDLIGRYIPLIKCLKLESRKMITIATVSRFILIPAFYFTAKFGDQGWMILLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNILVLFLVGGIFAGVVLDWLWLIGKGW 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03002 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 153 173 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun5g03002 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 352 368 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun5g03002 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 125 147 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun5g03002 417 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 389 413 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun5g03002 417 SUPERFAMILY MFS general substrate transporter 20 411 IPR036259 -
Viun5g03002 417 PIRSF ENT 5 415 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun5g03002 417 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 10 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun5g03002 417 Pfam Nucleoside transporter 127 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03002 Viun-Chr5 41240972 41244136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03002 1 415 Organic Solute Cotransporters AT4G05120 67.952 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03002 K15014 - gmx:100798899 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03002 5 41240972 41244136 Viun5g03002 5 41240972 41244136 ECH
Viun5g03002 5 41240972 41244136 Viun11g01511 11 31257500 31260419 PCT