Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01511 ATGGAGAACAGTGAGCCTCTAAGGCCTATTGAGGGAAAATTTGCTGCAATAGTAGTGTGTTGGCTTCTTGGAAATGGGTGCCTTTTCTCATGGAACAGTATGCTGACTATAGAAGATTACTATATTTACTTGTTTCCGAAATACCACCCCTCTAGGGTTCTGACTCTTGTATATCAGCCATTTGCGGTTGGAACACTGGCAATACTGGCTTACAAAGGGGATAGAATCAATACAAGGATAAGAAACCTATTTGGATACACTCTTTTCTTCATAAGCACTTTGGCAGTGTTACTTTTGGATTTAGCATCATCTGGTCAAGGAGGACTTGGAACTTTTGTAGGTATATGCATAGTTAGTGGTGCATTTGGAGTAGCAGATGCTCACACGCAAGGTGGAATGGTGGGAGAGCTATCTTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTGCAGCAGCATCTGGTGCACTAACATCTGCTTTGAGGTTGATTACAAAAGCAGCATTTAAGAATTCTAAGAATGGTCTTCACAAAGGAGCCATTTTGTTCTTTTCCATATCAACATTCTTTGAGCTTCTCTGTGTTCTTCTATATGCATTTGTGTTTCCTAAATTACCAATTGTGAAGTACTACCGTTCAAAAGTAGCATTTGAAGGATCAAACGCTGTTTCATCTGACCTTGCTGAAGCTGGCATTCAGACCTCATCGATAAGAGTCAAAGAGGGCAAACAATTAGAGCGCAAAGGGACTAAGCAACTGTTATTAGAAAACATTGATTACGCACTCGATTTGTTCCTAATATACGCACTTACACTATCAATTTTCCCCGGATTCTTATCAGAAGATACCGGATCACACAGTTTAGGCTCATGGTATGCTCTTGTGTTAATCGCTATGTACAATGTGTGTGATCTGATTGGAAGATACATTCCACTGTTGGAAAGTCTGAAGATGGAGTCCCGAAAAATGCTCACTATAGTCATTGTTGGTCGCCTTCTGTTTGTTCCGGCGTTTTATTTTACTGCAAAGTATGGCACACAGGGGTGGATGATAATGTTGACATCCCTTTTAGGGTTAACCAACGGTTACCTCACTGTTTGTGTTCTCACTTCAGCACCCAAAGGTTACATGGGACCAGAACAAAATGCTTTGGGAAACGTGTTGGTGTTGTTTCTTCTTGCAGGTATTTTTGCAGGTGTAACACTTGACTGGTTGTGGTTAATTGGGAAAGGGTGGTGA 1242 0.4114 MENSEPLRPIEGKFAAIVVCWLLGNGCLFSWNSMLTIEDYYIYLFPKYHPSRVLTLVYQPFAVGTLAILAYKGDRINTRIRNLFGYTLFFISTLAVLLLDLASSGQGGLGTFVGICIVSGAFGVADAHTQGGMVGELSYMLPEFIQSFLAGAAASGALTSALRLITKAAFKNSKNGLHKGAILFFSISTFFELLCVLLYAFVFPKLPIVKYYRSKVAFEGSNAVSSDLAEAGIQTSSIRVKEGKQLERKGTKQLLLENIDYALDLFLIYALTLSIFPGFLSEDTGSHSLGSWYALVLIAMYNVCDLIGRYIPLLESLKMESRKMLTIVIVGRLLFVPAFYFTAKYGTQGWMIMLTSLLGLTNGYLTVCVLTSAPKGYMGPEQNALGNVLVLFLLAGIFAGVTLDWLWLIGKGW 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01511 413 Pfam Nucleoside transporter 123 407 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun11g01511 413 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 5 407 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun11g01511 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 104 124 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun11g01511 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 385 409 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun11g01511 413 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 348 364 IPR002259 GO:0005337|GO:0016020|GO:1901642
Viun11g01511 413 PIRSF ENT 3 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01511 Viun-Chr11 31257500 31260419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01511 3 411 Organic Solute Cotransporters AT4G05120 65.281 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01511 K15014 - gmx:100784933 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01511 11 31257500 31260419 Viun11g01511 11 31257500 31260419 ECH
Viun5g03002 5 41240972 41244136 Viun11g01511 11 31257500 31260419 PCT