Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02982 ATGGAGGTGGAGAGTGAAAAATTAGGGTCTGTTGGGAAGGTTTGGAGTTTTTGTAGAAAGCCATTTTGGCAAACAACTCACACTCCATCTTCTTCTTCATCTTCCACATCTTACAACGTGCACAATGTTCACCAGCAAAATCAGAATAATCTTCAATCTGTTGATAGATCCGGTCAGCATTCTTCAACCACTGTCTCATCTGTGGCAAAGTCTCTGCTCCCTACAAAGAGGAGACTCCGTCTTGATCCTGCCAATAAGCTTTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATCGAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACAGCACCCAAGAGTTGTTATATGCGTCCTCCAGGTGGTGTTCTTGCTCCTGGTGAAAGTATAATTGCCACCGTATTCAAGTTTGTGGAGCCACCAGAGAGCAATGAGAAACCAATTGAACAGAAAAGCAAGGTTAAGTTTAAAATCATGAGCCTGAAAGTGCAAGGTGAAATCGATTATGTACCTGAACTGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTTCGGGTTATTTTTGTGGACCTTGAACGGCCTAGTCCTGTACTGGATAAGCTCAAACGAATGTTGGCTGAAGCTGATGCTGCACTTGAAGTGAGAAAGAAACCGCCGGAGGAGAAAGGTCCTCAAGTAGCCGGAGAAGGCCTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACTTGTTGGCCCAACAGCAGGTCCAAGGTGTTGATTCAGTGTAA 804 0.4303 MEVESEKLGSVGKVWSFCRKPFWQTTHTPSSSSSSTSYNVHNVHQQNQNNLQSVDRSGQHSSTTVSSVAKSLLPTKRRLRLDPANKLYFPYEPGKQVRSAIAIENTCKSHVAFKFQTTAPKSCYMRPPGGVLAPGESIIATVFKFVEPPESNEKPIEQKSKVKFKIMSLKVQGEIDYVPELFDEQRDQVAIEQILRVIFVDLERPSPVLDKLKRMLAEADAALEVRKKPPEEKGPQVAGEGLVIDEWKERRERYLLAQQQVQGVDSV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02982 267 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 200 IPR000535 -
Viun5g02982 267 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 77 260 IPR016763 GO:0005789
Viun5g02982 267 SUPERFAMILY PapD-like 67 207 IPR008962 -
Viun5g02982 267 Gene3D Immunoglobulins 74 202 IPR013783 -
Viun5g02982 267 Pfam MSP (Major sperm protein) domain 79 189 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02982 Viun-Chr5 41095863 41100208 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02982 - - var:108334494 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02982 5 41095863 41100208 Viun5g02982 5 41095863 41100208 ECH
Viun5g02982 5 41095863 41100208 Viun11g01495 11 31153542 31156166 PCT