Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01495 ATGGCGGTGGAGAGTGTCAAAACGGGTTCTGATGGGAAAGTTTGGAGCTTTTGTAGTATGCCATTTTGGCAAACAACTCATCCTTCTTCATCTTCTTCAACTTCCTCTATGCATAACAGTGTTCATCATCAGAGCCAGATTCTTCAATCTCTTGATAGATCCACTCATCAACCTTCCACCAATGTTTCTTCTGTGGCTAAGTCTTTGCTCCCCACAAGGAGAAGACTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCTAAGAGTTGCTATATGCGCCCTCCGGGTGGTATACTTGCACCTGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTCAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTTGCAGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACGCCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAATTAGCTGAGGCAGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCAAGAGGAGACAGGTCCTAGGGTAGCTGGAGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAAGCAGCAGGTTGAAGTGGTAGATTCAGTGTAA 792 0.4394 MAVESVKTGSDGKVWSFCSMPFWQTTHPSSSSSTSSMHNSVHHQSQILQSLDRSTHQPSTNVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPERPSPALDKLKRQLAEAEAALEARKKPQEETGPRVAGEGLVIDEWKERRERYLAKQQVEVVDSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01495 263 MobiDBLite consensus disorder prediction 28 68 - -
Viun11g01495 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 75 197 IPR000535 -
Viun11g01495 263 Pfam MSP (Major sperm protein) domain 76 186 IPR000535 -
Viun11g01495 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 74 257 IPR016763 GO:0005789
Viun11g01495 263 FunFam vesicle-associated protein 4-1-like 71 200 - -
Viun11g01495 263 SUPERFAMILY PapD-like 63 204 IPR008962 -
Viun11g01495 263 Gene3D Immunoglobulins 71 201 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01495 Viun-Chr11 31153542 31156166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01495 - - gmx:100820576 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01495 11 31153542 31156166 Viun11g01495 11 31153542 31156166 ECH
Viun5g02982 5 41095863 41100208 Viun11g01495 11 31153542 31156166 PCT