Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02771 ATGTATTATCTTACTCAGCCTACTACAGATCCATGTGGAAACTGTGAATCTCTGATAATAAGATGCATTAGACTATTAAGTTGCCTAGGAAAAAAACTAGGACCAAGGATTTTGGGGAGACGGTCTGAATCATCAGTTCCAGAAGTGATATACCAGACATTAAATGAACCTCTTGGCAAACATGAACTTCAGGGTAGGTTTGATATTCCACAAACCTTGGAAGAGTTCATGACTGAGATGAAGAAAGGTGGATATGATGCAAAGACATTTGCAGTTAAACTTCGAGAAATGGTGACCCTTATGGAAGAAAGGACCAGAATGGCTAAGATTCAAGAATATCTGTATCGACATGTAGCATCAAGCAGTATACCAAAACAACTTCATTGCCTTTCCTTGAGTTTGGCCAATGAACACACCAACAATGCCGCAGCACGCCTTCAACTCCCCTCTGCAGAACTAGTCCCTGCCCTGGTTGACAATTCCTACTTCCATTTTGTCCTTGCCTCAGACAATGTGCTGGCTGCATCAGTGGTTGCAACATCGCTTGTTCGCAACTTTTTGAGACCTCAGAAGGTTGTTCTGCACATAATTACAGATAGGAAGACTTATTACCCCATGCAGGCTTGGTTCTCATTGCATTCTTTGTCACCTGCTATAGTTGAGGTGAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGTAAGGTGCCTGTTCTGGAGGCTATGGAGAAGGATCAAAAGGTGAGGTCACATTTTAGAGGGGGTTCATCAGCTATAGTTGCAAATACAACTGAGAAGCCAAAAGTTATTGCAGCAAAACTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATCAGAATACATCTCCCAGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGATGATGACATCGTTGTACAAACTGATCTTTCACCTCTGTGGGACATTGAAATGAATGGAAAAGTGAATGGAGCTGTAGAAACATGTACAGGAGAAGATAAGTTTGTGATGTCAAAGAAGTTGAAAAGCTATTTGAACTTCTCCCACCCTCTAATATTCAAAAGTTTTAATCCCAATGAATGTGCCTGGGCTTATGGCATGAACATTTTCGATTTGGAGGCTTGGCGGAAGACTAATATAAGCAATATTTACCATTACTGGGTTGAGCAGAATATCAAGTCAGACCTGAGTTTGTGGCAGCTAGGAACATTACCTCCTGGATTGATAGCATTTCATGGCCATGTCCATGTTATTGATCCTTTCTGGCATATGCTGGGATTGGGGTATCAGGAAAATACAAGTTTTGTTGATGCTGAGAGTGCTGGTGTAGTTCATTACAATGGCAGGGCAAAGCCATGGCTAGAAATAGCTTTTCCACAACTAAGGAAATTGTGGACAAAGTATGTTGACTTCTCAGATAAGTTCATCAAGAGTTGTCACATTAGGGCATCATAG 1470 0.4136 MYYLTQPTTDPCGNCESLIIRCIRLLSCLGKKLGPRILGRRSESSVPEVIYQTLNEPLGKHELQGRFDIPQTLEEFMTEMKKGGYDAKTFAVKLREMVTLMEERTRMAKIQEYLYRHVASSSIPKQLHCLSLSLANEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNFLRPQKVVLHIITDRKTYYPMQAWFSLHSLSPAIVEVKALHHFDWFTKGKVPVLEAMEKDQKVRSHFRGGSSAIVANTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIEMNGKVNGAVETCTGEDKFVMSKKLKSYLNFSHPLIFKSFNPNECAWAYGMNIFDLEAWRKTNISNIYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFVDAESAGVVHYNGRAKPWLEIAFPQLRKLWTKYVDFSDKFIKSCHIRAS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02771 489 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 68 486 IPR029993 GO:0047262
Viun5g02771 489 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 165 483 IPR029044 -
Viun5g02771 489 Pfam Glycosyl transferase family 8 162 462 IPR002495 GO:0016757
Viun5g02771 489 SUPERFAMILY Nucleotide-diphospho-sugar transferases 164 486 IPR029044 -
Viun5g02771 489 CDD GT8_like_1 163 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02771 Viun-Chr5 39212811 39215725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02771 26 489 Glycosyltransferase AT5G54690 79.785 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02771 K20867 - gmx:100802623 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g02771 5 39212811 39215725 Viun5g02771 5 39212811 39215725 ECH
Viun5g02771 5 39212811 39215725 Viun11g01039 11 22503250 22506405 PCT