Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01519 ATGTCTGCTGCTGTGGACTCAGTTCGAGACCCTTTCAAAAAGTCATGGAAAACCCTTCGTTTTCCCAACATCAAACCCACCGAACTTCTCTTTTTCTTCTTCAAAGCTGGTCTTGCAGCTTCAACCTTCTTCCTCATAACCCTAGTTTTTCATCTTACACTATCCTACAACCAATCCCATTACCATAACAACAACCACACATCCTTCAAATTCATGCTCCAACAGCAGAAAACCACTCACCAACAATCACCCACCAACATCTCCCACCTCTTCTTCGGTATTGGCGGCTCCGTCGCCACGTGGGACACGCGCCGCCGATACTCCGACATGTGGTGGCGCCGCGGTGTCACCAGAGGCTTCGTGTGGCTGGACAGCCATCCCTCTGGGAACGCGACGTGGCCCGAGACTTCACCGCCGTATAAGGTGTCCGGTGACACGTCGACGTTCCGGTACACGTGCTCGTACGGGTCTCGATCCGCCATTCGCGTGGCGCGGATTGTGAAAGAGAGCTTCGAGCTGGGGTTGGAAAACGTGAGGTGGTTTGTCATGGGTGATGACGACACCGTTTTCTTCACCGACAACCTGGTTATGGTGTTGTCGAAGTATGATCATAATGAAATGTACTACGTGGGTGGGAATTCTGAGAGTGTGGAACAGGATGTGATACACTTTTACACTATGGCGTTTGGTGGTGGTGGGTTTGCTATAAGTTACCCTTTGGCGAAGGAGTTGGTGAGAATTTTGGACGGTTGCATTGATCGTTACGCAGAGTTTTATGGGTCTGATCAGAAAATTCAGAGTTGTATCAGTGAGATTGGCGTTCAGGTCACCAAAGAACCAGGTTTTCATCAGGTAGATATACGTGGGAATCCATATGGATTGTTAGCGTCACATCCGGTGGCCCCGTTGGTTTCCTTGCACCACTTGGATTACGTGGATCCGATATTTCCCGGTATGACCCGTGTCGACGCCGTTAAAAAACTGGTAACCGCCTACAAAACAGATACGGGTCGGGCCCTACAGAAAAGCTTCTGTTACGACCTCAGACGAAACTGGTCCGTTTCGGTGTCATGGGGCTACAGCGTTGAGATATACCCGTCTCTACGCACGGCCAAGGAACTAGAAACGGCGTTTCGGACATTCCGCACGTGGCGGAGCTGGAGTGATGGGCCGTTTACTTTCAATACCCGAACCCTTAGTTCCGACCCGTGTGAGAAACCAGTCGTGTATATGCTGGATCGGGTTCTCAGCTTGGACGGGGACATGACCCGGTCTATCTATAGAAGGCTCGAAAACTCACCGGGGAACGTTTGCACGCGTGATGACTACGCGCAGGCTTTAGACGTGCAATACGTCGACGTTTTTGCTTCACGCTTTACGCCGGATGTGTGGAAAAAGGCGCCACGTAGGCAATGCTGCGAGGTAATGAAGGGCTCAGATGGAGTGAACAATAATAGCGTGGTTGGCGTGAAGATGAGAGGGTGCCGTCGATTCGAGAGTGTGAGTCCTCTGTAG 1515 0.5122 MSAAVDSVRDPFKKSWKTLRFPNIKPTELLFFFFKAGLAASTFFLITLVFHLTLSYNQSHYHNNNHTSFKFMLQQQKTTHQQSPTNISHLFFGIGGSVATWDTRRRYSDMWWRRGVTRGFVWLDSHPSGNATWPETSPPYKVSGDTSTFRYTCSYGSRSAIRVARIVKESFELGLENVRWFVMGDDDTVFFTDNLVMVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAFGGGGFAISYPLAKELVRILDGCIDRYAEFYGSDQKIQSCISEIGVQVTKEPGFHQVDIRGNPYGLLASHPVAPLVSLHHLDYVDPIFPGMTRVDAVKKLVTAYKTDTGRALQKSFCYDLRRNWSVSVSWGYSVEIYPSLRTAKELETAFRTFRTWRSWSDGPFTFNTRTLSSDPCEKPVVYMLDRVLSLDGDMTRSIYRRLENSPGNVCTRDDYAQALDVQYVDVFASRFTPDVWKKAPRRQCCEVMKGSDGVNNNSVVGVKMRGCRRFESVSPL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01519 504 FunFam Fringe-related protein-like 77 333 - -
Viun5g01519 504 Gene3D - 77 320 - -
Viun5g01519 504 PANTHER FRINGE-RELATED 40 499 - -
Viun5g01519 504 Pfam Protein of unknown function, DUF604 219 473 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01519 Viun-Chr5 12314132 12316661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01519 7 503 Glycosyltransferase AT2G37730 55.837 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01519 - - gmx:100813750 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01519 5 12314132 12316661 Viun5g01519 5 12314132 12316661 ECH
Viun1g03109 1 39367334 39372023 Viun5g01519 5 12314132 12316661 ECH