Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g03109 ATGAATTACACTGGCTTGAAACTTTGTTATGAGTCTCCTCTTAAAGCATCCAGACTATCTTTTATCCCTGAAAGACTTGGTGATACTGTTGTTCTCTTCATAAGGTTTGGCATAGTTGTGTGCCTTGTTGCCTCCATATCACTCGCTCTCCACTCAGCATTTGCTAAACCAGACCGATGGTTCCCCTTACCGGACCATATACATACTGCAAAGAATACTTCTGTCATTGACAGCGGACCAACAAACATCTCACATATTCTGTTTGGCATCGGTGGATCATCTAACACTTGGCATGACCGTAGCAACTACAGCAAACTATGGTGGAATCCAAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTAAGATTTTGCGTGATGACATGTTAGTGCCATATCAAATCTCAAAGGGTTGGAGGCGGTTCAAGTATGTGCACTCAGCATCTGCAGTTCGCATTGCCCGCATAGTTTATGAGAGCTTTAAACTTGGTTTGCCAAATGTTAGGTGGTTTGTAATGGGAGATGATGATACTGTGTTCTTTACTGAGAACTTAGTTACTGTGTTGGGAAAATATGATCACAACCAAATGTATTATATTGGTGGGAGCTCTGAGAGTGTTGAGCAAGATTTGATGCATTCTTATGACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCTGCTCAACTAGCCAAAATAATGGATGGTTGTCTAAGCAGATACTACTACTTTTATGGTTCTGATCAAAGGGTTTGGGCCTGTGTGAATGAAATTGGTGTGCCTCTTACCAGAGAAGGTGGATTCCACCAGCTTGACATAAGAGGGGATCCATATGGTCTTCTAGCTGCACACCCCTTGGTACCACTTGTATCACTCCATCACCTTGACCAAGTGAACTCCTTGTTTCCCAACCAGACTCAAATTCACTCAATGGAAAAGCTCATCAGTGCATACGACGTCGACCCTGCCCGGATAGTGCAGCAAAGTTTTTGCTATGATCATAGGCATAGATGGTCAATATCCATCTCATGGGGTTACACCATACAAATATATCCATTATTGTTGATAGCATCAGACTTGCAGATGCCATTGCAGACATTTAAGACTTGGCGAAGTTGGAAAGACGGTCCCTTCACATTCAATACAAGACCAATGAGCTCTGACCCGTGTCAGAAGCCATCTGTGTTTTTCATGGATAAGGTAACGGAGGTGGGAAAAAGTGGAAGTGTCACTATCTACAAGAGACATGAAGGCACTGAAGGCAAGTGCACGAGAGAAGGCATTAATAACGTGGAAGTGGAAAGCATTACAGTTTCTGCGTTGAAACTGGACCCGGAATATTGGAAAAGTGTATTGCGCAGGCATTGCTGCCAATCATTGGCGGGTGGAAGCATAAACAATGGTAGTATGCATATCAGGATCAGGAAGTGCAGACCTCAAGAAACAATTACTATTTAG 1473 0.4304 MNYTGLKLCYESPLKASRLSFIPERLGDTVVLFIRFGIVVCLVASISLALHSAFAKPDRWFPLPDHIHTAKNTSVIDSGPTNISHILFGIGGSSNTWHDRSNYSKLWWNPNTTRGFVWLDKKPKILRDDMLVPYQISKGWRRFKYVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNQMYYIGGSSESVEQDLMHSYDMAFGGGGFAISYALAAQLAKIMDGCLSRYYYFYGSDQRVWACVNEIGVPLTREGGFHQLDIRGDPYGLLAAHPLVPLVSLHHLDQVNSLFPNQTQIHSMEKLISAYDVDPARIVQQSFCYDHRHRWSISISWGYTIQIYPLLLIASDLQMPLQTFKTWRSWKDGPFTFNTRPMSSDPCQKPSVFFMDKVTEVGKSGSVTIYKRHEGTEGKCTREGINNVEVESITVSALKLDPEYWKSVLRRHCCQSLAGGSINNGSMHIRIRKCRPQETITI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g03109 490 PANTHER FRINGE-RELATED 29 488 - -
Viun1g03109 490 FunFam Fringe-related protein-like 73 324 - -
Viun1g03109 490 Pfam Protein of unknown function, DUF604 210 462 IPR006740 -
Viun1g03109 490 Gene3D - 76 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g03109 Viun-Chr1 39367334 39372023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g03109 14 488 Glycosyltransferase AT3G11420 55.263 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g03109 - - gmx:100802549 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03109 1 39367334 39372023 Viun1g03109 1 39367334 39372023 ECH
Viun1g03109 1 39367334 39372023 Viun5g01519 5 12314132 12316661 ECH