Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01367 ATGTTTCTTTTGCATGAGTTCTTTCCAGTTGCAATTCTCATCGCAGAAAGAGTTCCAACTTCTAACAAAATGTTTGATGACCGACTTCTCAAACGTTCTAAGATAGCTATCTTCTGTCTAATAATTTTCTCAGCAATAATTTTTATTATCCTTTGTGATGATCTTATTTACCAGGATTCTCTACACTTACAAGTGTTGCAAGCTCGACCTCACAGAAATGGAGAGGGTATAAGGTCAACTCGTGTTCTCACACACACCCCTTTACGTTCCTTGCAACAGAACGAAGGAGTCAGAAAAGAAAATCCTGGAGCATTAGTTGCTCCATTTAATTCAACCGAAGAAGAAAGAATTGGTTGGTTTAAAGGGAAGCTTCACGAGTTCAAGATTCTCCAGTCGGATGAATTGAGTAGGAAATTCCATGCTCGGATTGTGAGGTTTTTCAGCCATGAATGCGAGTCTAAATTTTTCATGACTTGGGAGTACCCTGCAGGCTCATTTGCAGAAAGAGAGTTGTTGTCGATAAAGAGTATTTTCAAGGTGCATCCCAAGGCTTGTTTGGTGATTCTATCGAGGACTTTGGACTCCATTCTTGGTTGTAGGATCCTGAAGCCACTTCTTGATGGGAGGTTCAGAGTTCAGGCAATGGCCCCAGACCTGCCATTTCTCTTCAAGGGGACTTCAGCTGAAGCATGGTTGAATGAGTTGGTGAAAGGGAAGAAGGACCCTGGTGAGATTTCTCTGTTTCAGAACCCATCTAACTTGATGAGACTTGCAGTTCTGTACAAATATGGTGGTGTGTACCTAGACATGGATTTTATAGTCTTGAAACCTTTAACTGTGTTGAGGAATTGTATTGGAGCACAAAGCATGGACTCTGGGAATAAGAACTGGACTAGACTTAACAACGCAGTCCTGATATTTGACACCAATCATCCACTTCTTCTCAGATTCATTAACGAATTTGTGTTAACTTTTAATGGGAACAAATGGGGGCATAATGGTCCCTACCTGGTTTCCAGAGTGGTTGAGAGACTGGGGGAAAGGCCAGGCTTCAACTTCACAATCTTGCCTCCTCTGGCCTTTTATCCAGCTGATTGGAAAAAGATTGGTGGTCTCTTCAGGGAGCCCAAAACTAGAGGTGAATCAAAATGGGTTCAAGCCAAACTGCTTCAGCTTAGTAGTGAGAGTTATGGGGTTCATTTATGGAACAAAGAAAGTAGGAATTTGAAGATTGAAGATGGAAGTGTCGTGGCTAGACTCATATCTGATCGGTGTAACATTTGCAAGTATCTCTAG 1296 0.4182 MFLLHEFFPVAILIAERVPTSNKMFDDRLLKRSKIAIFCLIIFSAIIFIILCDDLIYQDSLHLQVLQARPHRNGEGIRSTRVLTHTPLRSLQQNEGVRKENPGALVAPFNSTEEERIGWFKGKLHEFKILQSDELSRKFHARIVRFFSHECESKFFMTWEYPAGSFAERELLSIKSIFKVHPKACLVILSRTLDSILGCRILKPLLDGRFRVQAMAPDLPFLFKGTSAEAWLNELVKGKKDPGEISLFQNPSNLMRLAVLYKYGGVYLDMDFIVLKPLTVLRNCIGAQSMDSGNKNWTRLNNAVLIFDTNHPLLLRFINEFVLTFNGNKWGHNGPYLVSRVVERLGERPGFNFTILPPLAFYPADWKKIGGLFREPKTRGESKWVQAKLLQLSSESYGVHLWNKESRNLKIEDGSVVARLISDRCNICKYL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01367 431 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 92 429 IPR044789 -
Viun5g01367 431 Pfam Alpha 1,4-glycosyltransferase conserved region 307 428 IPR007652 -
Viun5g01367 431 SUPERFAMILY Nucleotide-diphospho-sugar transferases 201 428 IPR029044 -
Viun5g01367 431 Pfam Glycosyltransferase sugar-binding region containing DXD motif 168 289 IPR007577 -
Viun5g01367 431 Gene3D - 213 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01367 Viun-Chr5 10342708 10344953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01367 24 428 Glycosyltransferase AT3G09020 47.677 3.77e-130 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01367 K01988 - gmx:100812965 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01367 5 10342708 10344953 Viun5g01367 5 10342708 10344953 ECH
Viun5g01367 5 10342708 10344953 Viun10g01142 10 20549037 20550504 PCT