Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01142 ATGAGGATGTTTGTTCATCAGGTGCTTAAAAATACCAAGCTATCTGTCTTTTCTCTAATAACTTCCTCTGCCATAGTTTTTCTCATATATGCAGATGGTGTTACCTACCATGATTGCGTACACTCTGCATCTAACACAGAAACTCCAGAGAAGTTGGAACTTCAAAATAACAGAACAACAAAAACAATAAGCCCAACACTTGTTCACATAAATTTCCGTTCCATTCAAGAAAAGAAGGATGAAGCTGAGAGGAAAAACCACTATACTCTAGTTGCCCCATTGAATGCTACAGAAGAAGAAAGAAAAGTTTGGTTTCGAGAACATCTGCATCACTTCAAGATCCTCAAGTCAAACAACTTGACCCAACAGTTTCATGCTCGAGTTTCGGTATTTTTCGGACGCGAATGCGAGGCCCAGTTTTTCATGACATGGATTTCACCTGCAAGTTTGTTTGGAGGGAGAGAATTACTGTCAATGGAAAGCATTTTCAAGAGCCACCCCAAGGCATGTCTGGTAATTCTATCGAGAACTCTGGACACCAGACATGGCTACAAGATCCTGAAACCACTGCATGATCGTGGGTTCAAAGTGCAAGCAATGGCCCCAGACTTTTCATTTTTGGTCAAGAGGACTCCAGCAGAAACATGGTTTCATGAGCTAAAGAAGGGTAAAAAGGATCCTGGTGAGATTTCCTTATCTCAGAATCTATCTAATCTGATAAGACTTGCAGTTCTCTACAAATATGGTGGTATCTACATAGATACAGATTTTATAATTATGAAACCCTTAAAAGGGTTAAGTAATTCTATTGGTGCACAGAGCACGAGTTTGGATTCTAAGCACTGGACCAGATTAAATAATGCAGTTCTGATTTTTGATATGAGACATCCACTTCTGCATAGATTCATCAGTGAATTTGCTCTGACTTTTGATGGAAACAAATGGGGTCATAACGGCCCCTATTTGGTTTCAAGAGTAATTAAGAGGCTGAGGAAAAGACGCGATTTCAACTTAACAATTTTGCCTCCTAAGGCCTTTTATCCAGTAGACTGGAACAAGATAACTGGGTTCTTTACAAAACCAAAAACTCAGAGCGAATCAAGATGGGTAGAAGCCAAACTGCTTCAGCTCAGTGGGAAAAAGACTTACGGGATTCATCTATGGAACAAACGTAGTAGCAGATTGACAATTGAAGAAGGAAGCGTCATTGATAGACTTGTATCAAATTATTGTGTCATTTGCAACCATAAATAA 1254 0.3939 MRMFVHQVLKNTKLSVFSLITSSAIVFLIYADGVTYHDCVHSASNTETPEKLELQNNRTTKTISPTLVHINFRSIQEKKDEAERKNHYTLVAPLNATEEERKVWFREHLHHFKILKSNNLTQQFHARVSVFFGRECEAQFFMTWISPASLFGGRELLSMESIFKSHPKACLVILSRTLDTRHGYKILKPLHDRGFKVQAMAPDFSFLVKRTPAETWFHELKKGKKDPGEISLSQNLSNLIRLAVLYKYGGIYIDTDFIIMKPLKGLSNSIGAQSTSLDSKHWTRLNNAVLIFDMRHPLLHRFISEFALTFDGNKWGHNGPYLVSRVIKRLRKRRDFNLTILPPKAFYPVDWNKITGFFTKPKTQSESRWVEAKLLQLSGKKTYGIHLWNKRSSRLTIEEGSVIDRLVSNYCVICNHK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01142 417 Pfam Alpha 1,4-glycosyltransferase conserved region 292 415 IPR007652 -
Viun10g01142 417 Gene3D - 151 373 - -
Viun10g01142 417 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 11 416 IPR044789 -
Viun10g01142 417 Pfam Glycosyltransferase sugar-binding region containing DXD motif 154 276 IPR007577 -
Viun10g01142 417 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 415 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01142 Viun-Chr10 20549037 20550504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01142 3 415 Glycosyltransferase AT3G09020 44.794 2.64e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01142 K01988 - gmx:100781975 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01367 5 10342708 10344953 Viun10g01142 10 20549037 20550504 PCT