Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01302 ATGGGAATTTCCCATGTTCCTTTCCTTTTCATCCTATTATGCTACTGCTTCAGGATACACCACACTGTTTATTTCACCCGGGTTTCTGGTCAAATTGTTGAAGATCAACAACAATCATTGCTAAAACTGAAGAACAGCCTCAGATTCGAGCAAGAAAAATCTCACAAACTTGTGTTCTGGAATTCAAGCATAGATTGCTGTAAGTGGATAGGTGTAACCTGTGATCAGGAGGGACATGTTATTGGCCTTGACCTGAGTGGAGAATCAATCAATGGTGGATTTGACAATTCAAGTACTCTTTTCAAGCTGCAGAGTCTCCGGATACTGACTTTGTCTGTTAATAACTTCAGTTCTGAGATACCATCCGGATTCAGCAAGTTGAAGAACTTGACATATCTGAATTTATCTCATGCTGGTTTTGTGGGGCAGGTTCCAATAGAGATTTCTTCCCTGGCAAGGTTGGTTACTCTTGATATCTCTTCTCTTTCCTTTCTCTATAATCAACCGCTGAAACTTGAAAGCTTAGATCTACAGATGCTTGTCAAAAACTTCACCATGATTAGACAATTGTACATGGATGGGGTGAGTGTATCAGCTGAGGGCAATGGATGGAGCAATGCTTTGTTGCAGCTACCTAGCCTCCAGGAACTGAGCATGTCAAACTGCAATATCTCAGGACCCCTTCATCCTTCCCTTACAGCACTTCAAAACCTATCAATCATTCGTCTTGATCAAAACAATTTATCATCCCCGGTGCCAGGAACCTTCGCTGATTTTCCAAAATTAACATCTCTTCACCTTAGTGCCTGTAAATTGACGGGAATATTTCCAGAGAAGATCTTTCAGTTAGCAACATTGTCTGACATAGACATATCATTCAACTATGATCTTAATGGATCTTTGCCTGAATTACCTCTGAATGGTTCCCTTCAGGAATTAATTGTGAGTCACACGAGGTTCTCAGGAGCATTACCAGCTTCTATAGGTTATCTTAAGCAGTTATCCATCTTAGATATTTCTAATTGCCATTTTAACGGAACACTGCCCAGTTCAATGTCAGGACTCAAGGAACTCACTTCTCTGCGTTTGCGGTTTAATAACTTCACTGGTCTAATTCCGTTCTTGAATATGTCCAGGAACCTCATGCATTTAGAATTCTCACACAATTATTTCACAGGTTCCATCACTCATGCTCACGTGGAAGGCCTAAGAAAGCTGGTTCACATTGATTTACAGGACAATTTACTTGATGGAAACATCCCTGCTTCTCTTTTTGCACTTCCATTGGTACAAAGTATTTATCTTTCCAACAACCGTTTTCGTGGACAGATTGATGAATTTTCAAACATCTCCTTCTCCATGTTACAGATTCTTGATTTAAGAAGTAATAACTTAGAAGGCCCCATTCCTCAATCTATTTTTAATCTCACGTCTCTTAATGTCCTTGAACTGTCATTCAACAAGTTAAATGGCAGAATAATGGTAGATGTGCTTCTGAGACTTTCAAATCTAACTACACTAGCTCTTTCACACAACAACTTGTCGGTGGAGACAAATCTTATAGATGTAGGCCTTTTATCTTCCTTCCGCGATATGAGCCGTTTAGAGTTGGCTTCCTGCTACCTCACAGAGTTCCCTAGTTTCTTGAAAAACCATTCCAGAATAACCACTTTAGACCTCTCAAGTAACCATATTCAAGGACCAATACCAGCATGGATCTGGCAACTTAACTCTCTTGTTCAATTAAATCTTTCTCACAATTTTCTCAGCAGTTTAGAAGGATCTGTGCAGAACACTGGTTCCAATCTGAGCGTCCTTGACCTTCATGCTAACCAACTCCAAGGGAAGCTTCAAATATTCCCAGTGCATGCCACTTATTTGGACTATTCAAGTAATAATTTCAGTTTCACTGTTCCTTCAGATGTTGGTACTAACGTGTCTTCCATAATTTTCCTGTCTCTGTTCAAAAATAATTTATCTGGTAGTCTTCCTCAATTCTTGTGCAATAGTTCACAGCTGAAAGTTCTGGATGTTTCCTATAATCATTTCAATGCGATGATTCCAGAGTGCCTAACACAGAGTGACGCAATTGAAGTATTAAATCTGCAACATAACAAGTTCTATGGAATTATTCCAGATAAATTTCCATCATCTTGTGCTGTAAGGACTCTGGATCTCAATAGTAATCAACTACACGGCCTAATTCCCAAATCCATTGCCCATTGCACATCATTAGAGGTGTTGGATCTCGGAATCAATCACGTAGATGATGCATTTCCATACTTCTTAAATACAATATCCACACTCCGTGTCCTGATTTTGAGGGGAAACAAATTTCAAGATCATATCGAATGTCCTGATACTAACAGTACTTGGCCAATGCTTCAAATTTTTGATGTGGCTTTGAACAACTTTAGTGGTTTACTTCCAGGAAAATGTTTCAAAACATGGAAGGCAATGAAGCTTGATGAATATCATGATGCATCAAAGTTCAATCGCATAGGATCTGAGGTCCTTAGATTTGGTGGTATGTATTATCAGGATTCTGTGATCCTTACAATAAAAGGCTTACAGTTGGAGTTTGTTAAAGTCCTGAATCTCGTCACATCTGTCGACTTCTCGTCCAACAATTTTGATGGAACGATACCAGAAGAGCTTATGGATTTTACTGGACTTTATGCTCTCAACTTGTCTCATAATGGTTTAACAGGTCAAATCCCTTCATCTATGGGGAATCTAAAAGAGGTCGAGTCATTGGACCTGTCATGTAACAATTTGGATGGAGAAATTCCCACAGAGCTTGCAAGTTTAAATTACCTCTCATATCTAAACCTTTCCTATAACTTTCTGAAAGGGAAAATCCCTGAAGGTACCCAACTTCAATCATTTGATGCATCTTCCTTTGATGGTAATGTAGAATTGTGTGGACCTCCTTTGCCTAAAAACTGTAGGAATGAAATACCTGGGCCATCAACTACACCAAATGCAAGGTCGCATGGAACTGGTGGAAATATCATAAGGGCTGAATTGGGGTTTGTTTTTGGCCTTGGACTTTTCATTGTTCCCCTGCTGTTTTGGAAGAAATGGAGGGTAAGGTACTGGAAGCATGTGGACTCCATTCTGTGCGGTATCTTCCCACAGCTGAATCTTGAGTACGAAACCCGTGGAGGACAAAGCTATCAAGTATTAAGATGGAGGCCTTAG 3204 0.3973 MGISHVPFLFILLCYCFRIHHTVYFTRVSGQIVEDQQQSLLKLKNSLRFEQEKSHKLVFWNSSIDCCKWIGVTCDQEGHVIGLDLSGESINGGFDNSSTLFKLQSLRILTLSVNNFSSEIPSGFSKLKNLTYLNLSHAGFVGQVPIEISSLARLVTLDISSLSFLYNQPLKLESLDLQMLVKNFTMIRQLYMDGVSVSAEGNGWSNALLQLPSLQELSMSNCNISGPLHPSLTALQNLSIIRLDQNNLSSPVPGTFADFPKLTSLHLSACKLTGIFPEKIFQLATLSDIDISFNYDLNGSLPELPLNGSLQELIVSHTRFSGALPASIGYLKQLSILDISNCHFNGTLPSSMSGLKELTSLRLRFNNFTGLIPFLNMSRNLMHLEFSHNYFTGSITHAHVEGLRKLVHIDLQDNLLDGNIPASLFALPLVQSIYLSNNRFRGQIDEFSNISFSMLQILDLRSNNLEGPIPQSIFNLTSLNVLELSFNKLNGRIMVDVLLRLSNLTTLALSHNNLSVETNLIDVGLLSSFRDMSRLELASCYLTEFPSFLKNHSRITTLDLSSNHIQGPIPAWIWQLNSLVQLNLSHNFLSSLEGSVQNTGSNLSVLDLHANQLQGKLQIFPVHATYLDYSSNNFSFTVPSDVGTNVSSIIFLSLFKNNLSGSLPQFLCNSSQLKVLDVSYNHFNAMIPECLTQSDAIEVLNLQHNKFYGIIPDKFPSSCAVRTLDLNSNQLHGLIPKSIAHCTSLEVLDLGINHVDDAFPYFLNTISTLRVLILRGNKFQDHIECPDTNSTWPMLQIFDVALNNFSGLLPGKCFKTWKAMKLDEYHDASKFNRIGSEVLRFGGMYYQDSVILTIKGLQLEFVKVLNLVTSVDFSSNNFDGTIPEELMDFTGLYALNLSHNGLTGQIPSSMGNLKEVESLDLSCNNLDGEIPTELASLNYLSYLNLSYNFLKGKIPEGTQLQSFDASSFDGNVELCGPPLPKNCRNEIPGPSTTPNARSHGTGGNIIRAELGFVFGLGLFIVPLLFWKKWRVRYWKHVDSILCGIFPQLNLEYETRGGQSYQVLRWRP 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01302 1067 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Viun5g01302 1067 SUPERFAMILY RNI-like 109 516 - -
Viun5g01302 1067 Gene3D Ribonuclease Inhibitor 453 520 IPR032675 -
Viun5g01302 1067 Coils Coil 33 53 - -
Viun5g01302 1067 Gene3D Ribonuclease Inhibitor 621 987 IPR032675 -
Viun5g01302 1067 ProSiteProfiles Leucine-rich repeat profile. 578 599 IPR001611 GO:0005515
Viun5g01302 1067 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 234 984 IPR046956 -
Viun5g01302 1067 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 184 455 - -
Viun5g01302 1067 SMART LRR_typ_2 259 283 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 355 378 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 235 258 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 501 528 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 103 126 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 576 598 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 452 476 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 913 937 IPR003591 -
Viun5g01302 1067 SMART LRR_typ_2 403 427 IPR003591 -
Viun5g01302 1067 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 860 983 - -
Viun5g01302 1067 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 590 827 - -
Viun5g01302 1067 SUPERFAMILY L domain-like 63 178 - -
Viun5g01302 1067 Pfam Leucine rich repeat 379 440 IPR001611 GO:0005515
Viun5g01302 1067 Pfam Leucine rich repeat 891 948 IPR001611 GO:0005515
Viun5g01302 1067 Pfam Leucine rich repeat 237 294 IPR001611 GO:0005515
Viun5g01302 1067 Pfam Leucine rich repeat 534 587 IPR001611 GO:0005515
Viun5g01302 1067 Pfam Leucine rich repeat 698 754 IPR001611 GO:0005515
Viun5g01302 1067 Gene3D Ribonuclease Inhibitor 306 452 IPR032675 -
Viun5g01302 1067 Gene3D Ribonuclease Inhibitor 521 620 IPR032675 -
Viun5g01302 1067 Gene3D Ribonuclease Inhibitor 33 197 IPR032675 -
Viun5g01302 1067 SUPERFAMILY L domain-like 529 980 - -
Viun5g01302 1067 Gene3D Ribonuclease Inhibitor 198 305 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01302 Viun-Chr5 9522048 9525662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01302 10 1032 Receptor kinase-like Gene Family AT1G47890 32.868 2.79e-143 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01302 - - gmx:100800048 1407.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01440 10 28764343 28765162 Viun5g01302 5 9522048 9525662 PCT