Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01260 ATGTTCACCCAATTCTTCTTCTTCTTTCTCCTCTTCACTCCCTTCATCTTCACCACACAACAAGACACCCATGATTTCGTGCGTACCTTAGACCGCAAAATGTTTGGTTTGGACCAAAACCAAGAAAAGTTCAGCCATTTCAGGTTCTATTGGCACGACGTGGTGAGTGGACGCAACCCTTCTTCCATAGAAGTAGTTTCATCAGGGTTGAAGAACTCAACGACGTCGTTTGGAGCGGTGAACATGATAGAGAACCCTTTGACACTGGAACCCCAATTGAACTCTCAGTTGGTGGGGATGGCACAGGGGTTCTATGCTTCGACGTCGCAGAGTGAGGTTACCTTGTTGATGGCCATGAACTTCGCCATCACTGAAGGGAAGTACAATGGTAGCAGCTTCACCATTCTTGGAAGGAACCCTGTTTTCAACAAGAAGAGGGAGATGCCTGTGATCGGTGGAAGTGGCCTCTTTCGATTCGCTAGGGGTTATGCTCAGCTCAGAACTCACTGGTTCTCACCCGCCACCAGGGACGCCATTGTTGAGTACACTGTTTATCTTCTGCATTATTGA 570 0.4789 MFTQFFFFFLLFTPFIFTTQQDTHDFVRTLDRKMFGLDQNQEKFSHFRFYWHDVVSGRNPSSIEVVSSGLKNSTTSFGAVNMIENPLTLEPQLNSQLVGMAQGFYASTSQSEVTLLMAMNFAITEGKYNGSSFTILGRNPVFNKKREMPVIGGSGLFRFARGYAQLRTHWFSPATRDAIVEYTVYLLHY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01260 189 Pfam Dirigent-like protein 45 186 IPR004265 -
Viun5g01260 189 PANTHER NUCLEOPORIN-RELATED 33 185 IPR004265 -
Viun5g01260 189 Gene3D - 33 186 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01260 Viun-Chr5 9064413 9065319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01260 - - gmx:100796078 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01260 5 9064413 9065319 Viun10g01332 10 25674557 25675332 PCT
Viun10g01342 10 25970802 25971664 Viun5g01260 5 9064413 9065319 PCT