Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01342 ATGGCTACCCAATTCCTCATTCTCACCCTTCTCATCTTCTGCAGCACCCTCACTTTCACCACAGCCCAAGACACAGACACAGGTTTCGTAGGTTCACCAGATCCCAAGACATTAGGTTTAAAGAAAAAAAAAAGTTTTAGCCATTTCCGGTTTTACTTCCACGAGAGGTTCTCGGGAAGCAACCCCACCTCCGTCTTTGTAGTTCCGCCTGTACCTAAGTTCAACTCCACCACCTCTTTCGGCACGGTGGGGGTCTTGGACACCACCTTGACAGTGGGACCGGAGCCAACCTCCAAGGTCGTGGGAAGAATCGAGGGCTTGGTTGCAGCAACGTCGCAGAGGGTTTTTACCTTGTCGGTGATTCTGAACTTCGTGTTAACCGAAGGGAAGTACAATGGGAGCACCATCACTTTGTTGGGGAGGAACAGCATCGCACAAAAGATCAGGGAGATTCCTGTGATTGGTGGCACTGGATTGTTCAGATTTGCCACGGGATATGCAGAGACTAATACCATTTTTCTTGATCCAAAAACGACGGACACCATTGAATACAACATTTATGTTTCCCACTACTGA 576 0.4844 MATQFLILTLLIFCSTLTFTTAQDTDTGFVGSPDPKTLGLKKKKSFSHFRFYFHERFSGSNPTSVFVVPPVPKFNSTTSFGTVGVLDTTLTVGPEPTSKVVGRIEGLVAATSQRVFTLSVILNFVLTEGKYNGSTITLLGRNSIAQKIREIPVIGGTGLFRFATGYAETNTIFLDPKTTDTIEYNIYVSHY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01342 191 Gene3D - 36 189 IPR044859 -
Viun10g01342 191 PANTHER NUCLEOPORIN-RELATED 35 187 IPR004265 -
Viun10g01342 191 Pfam Dirigent-like protein 47 188 IPR004265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01342 Viun-Chr10 25970802 25971664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01342 - - vra:106755110 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01342 10 25970802 25971664 Viun5g01260 5 9064413 9065319 PCT