Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01066 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAAGCAGGTGCTCGTTCCCGCGCTCGAGAAAATCATCAAGAACGCGTCGTGGAGAAAACACGCGAAGCTCGCGCACGAGTGCAAATCCGTTATCGAAATCCTAACCTCACCGCCGAAGCCTCAGTCGCCGGCCTCCGACGATGCCGCCGAGCCGGAGGCATCGATCCCCGGACCGATCCACGATGGCGGTCCAGTGGAGTACTCGCTCGCGGAGTCGGAGTCGATCCTACGCCCGCTCATCGCCGCCGCGGGCTCCGGCGTCCTGAAGATCGCCGATCCCGCTGTCGACGCCGTACAGCGACTCATCGCGCACGGATTCCTTCGTGGCGAGGCCGACTCCAGCGGCGGCGCGCCCGAGGCCAAGCTGCTTGCGAGCTTGATCGAGGCAGTGTGCAAGTGCCACGAATTCGGCGACGACGCCGTCGAATTGCTCGTCCTGAAGACGCTCTTGTCAGCGGTGACCTCGATTTCGCTACGAATTCACGGTGATTGCTTGCTCTTGATTGTGAGAACTTGTTATGACATATACCTAGATAGTAAGAATTTGGTGAATCAGACGACGGCGAAAGCGTCGTTGATTCAGATGTTAGTGATTGTGTTTAGGAGGATGGAGGCGGATTCGTCCACGGTTCCTGTTCAGCCTATTGTTGTGGCTGAATTGATGGATCCTGTAGAGAAATCTGACGCGGACAACTCTATGACCCAGTCTGTACAGGGTTTTATCACCAAGATTGTGCAAGACATCGATGGAGTTCTGAATCCGGTGGCGCCGTCATCTTTGGGCGCACATGACGGTGCCTTTGAGACAACAGTGGCGGCAACGGTGGAGGCTGCGAATCCAGCGGATTTGTTGGATTCCACTGACAAAGACATGTTGGATGCCAAGTATTGGGAGATCAGTATGTATAAGACGGCATTGGAAGGGAGGAAAGAGGAGCTGGTGGATGGGGAGGTGGTGGAGAGGGACGATGATCTGGAGATTCAGATTGGGAATAAGCTCAGGAGAGATGCATTTTTGGTGTTCAGGGCGCTTTGTAAGTTGTCCATGAAGACTCCGACGAAGGAGGCGTCTGTGGACCCTCAGTTGATGAAGGGGAAGATTGTGGCCTTGGAGTTGTTGAAGATCTTGTTGGAGAATGCTGGAGCTGTCTTCAGGACTAGTGAAAGGTTTTTGGGTGCCATCAAGCAGTACTTATGTTTATCATTGCTGAAGAACAGTGCCTCAACTCTTTTGATCGTTTTTCAGCTATCTTGCTCCATCTTCATTAGTCTGGTATCAAGATTTAGAGCTGGACTGAAAGCAGAAATTGGAGTATTTTTCCCCATGATTGTTCTTAGGGTTCTAGAAAATGTTGCTCAACCTAATTTCCAGCAAAAGATGATTGTGCTTCGTTTTCTGGAGAAGCTCTGTGATGATTCACAGATATTGGTAGACATTTTTATCAATTATGACTGTGATGTCAATTCAACAAACATATTTGAGAGGATGGTAAATGGACTCCTTAAAACTGCCCAGGGTGTCCCTCCTGGTGCAACAACCACAGTTTTGCCACCTCAAGAGGAAACACTAAAACTTGAAGCGATGAAGTGTTTAGTTGCTGTTTTAAAATCTATGGGAGACTGGATGAACAAACAGTTGCGCATTCCAGATCCTCTTTCAGGCAAAAAAGTTGAAGCAGTTGATAATGACCATGAAGCTGGAGTTCCTCCCACTGCAAATGGGAATGGTGAAGAGCCAGCCGATGGATCAGACACTCAGTCTGAAATCTCCAATGAGACATCTGAGGTTTCAACCATTGAGCAACGTCGGGCTTATAAACTGAAACTTCAGGAAGGTATATCACTTTTTAACAGGAAGCCAAAGAAAGGAATTGAATTCCTCATCAATGCCAACAAAGTGGGTAATTCACCAGAGGAAATAGCAGCTTTTCTTAAAGATGCTTCTGGGTTGAACAAGACTTTGATTGGGGATTATTTAGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCGTATGTGGATTCTTTTGACTTTCAAGGGTTGGAGTTTGATGAAGCAATCAGGGCCTTTCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAGAAAATTGATCGAATTATGGAAAAGTTTGCAGAACGATATTGCAAATGTAATCCAAAAGTCTTTTCTAGTGCTGATACGGCGTATGTTCTTGCGTATTCTGTGATACTGCTTAACACTGATGCTCACAATCCTATGGTGAAAAACAAGATGTCCGCTGATGATTTCATAAAAAATAATCGTGGCATAGATGATGGAAAAGATGTACCAGAAGAATACTTGAGGTCTTTGTATGAACGAATATCTAGAAATGAGATTAAAATGAAAGATGTTGATCTGGAAACCCAGCAAATACAGGCTGTGAACTCGAACAGACTTTTAGGCTTGGATAGTATATTGAATATTGTGATCCGGAAGCGAGGGGAAGACAGTAATATGGAGACCAGTAATGATCTAATCCGACATATGCAGGAACAATTCAAAGAAAAAGCTCGCAAAACAGAGTCAGTCTATTATGCAGCAACTGATGTTGTAATCCTCAGATTCATGATTGAGGTCTGCTGGGCACCAATGCTAGCTGCCTTCAGTGTTCCTCTTGATCAAAGTGATGATGAATTTACAATAGCACTGTGTCTTGAGGGATTCCGATATGCTATTCATGTTACTTCTGTAATGTCCATGAAGACTCACAGAGATGCTTTCGTGACTTCATTAGCGAAATTTACCTCCCTTCATTCTCCTGCAGATATTAAGCAGAAAAATATAGATGCGATCAAGGTGATTGTTACTATTGCTGATGAGGATGGGAATTACTTACAAGAAGCTTGGGAGCATATCTTGACCTGTGTTTCCCGATTTGAACATTTACATCTTCTTGGAGAGGGTGCCCCACCGGATGCCACATTCTTTGCATTCCCTCAAAATGATTCTGAGAAAACAAAGCAATCAAAATCAACTATTCTTCCTGTTTTAAAGAAGAAGGGCCCTGGAAGGATGCAATATGCAGCTGCCACAGTGATGCGGGGGTCATATGATAGCACTGGAATCGGCAGTAATACTTCTGGAGCTGTGACGTCGGAACAGGTGAACAGTCTAGTCTCCAATTTGAATATGTTGGAACAAGTTGGAAGCTCAGAAATGAGTCGCATATACACTCGGAGTCAGAAGCTGAACAGTGAGGCCATAATAGATTTTGTCAAGGCTTTGTGCAAAGTCTCTATGGAGGAGCTTAGATCTCCATCTGATCCACGGGTGTTCAGCCTTACAAAGATAGTTGAGATTGCACATTATAATATGAACCGCATCAGGCTTGTGTGGTCAAGCATATGGCATGTTCTCTCAGATTTCTTTGTAACCATTGGCTGTTCTGGGAACCTTTCAATTGCAATTTTTGCAATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGAGAGGAATTGGCTAACTATAATTTTCAGAATGAATTTATGAAGCCTTTCGTCATTGTTATGAGGAAGAGTAGCGCTGTTGAAATTAGAGAACTTATCATTAGATGTGTCTCCCAAATGGTTTTATCTCGTGTCAACAATGTAAAATCAGGATGGAAGAGCATGTTCATGGTATTCACAACAGCAGCATATGATGACCACAAAAATATTGTGCTCTTGTCTTTTGAAATTATGGAGAAAATTATTCGAGATTACTTTCCGTACATCACTGAGACTGAAACCACAACCTTTACAGACTGTGTTAATTGTCTAATTGCATTCACCAATAGCAGATTCAACAAAGAGATTAGCCTAAATGCCATTGCTTTCCTTCGATTCTGTGCCACAAAACTAGCAGCAGGAGACCTTGGATCTTCGTCAAGAAATAGTGACAAGGAAACTTATGGAAAAGTATCTACTCCTTCACCTCGCACAGGAAAAGAGGGGAAACAAGAAAATGGGGAGGTGACAGAAAAAGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTGTCCGAACTTAGCTTTGACCCAAGATCTGAAATAAGGCAAAGCGCCTTGAAAGTCCTGTTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTACCTTTATGGGAAAGAGTATTTGAATCAGTCCTATTTCCAATATTTGATTATGTTCGTCATGCTATTGATCCTTCTGGGAATAGCTCTGAGGTCAATGAATCTGAGTCTGACGGTCAGCTTGATCAAGATGCATGGCTTTACGAGACATGCACACTAGCCTTGCAATTGGTAGTAGATCTTTTTGTCAACTTCTATAACACTGTCAATCCACTTTTAAGAAAGGTTTTGATGCTCCTGGTAAGCTTTATAAAGCGCCCTCATCAAAGCCTGGCTGGCATTGGTATTGCTGCTTTTGTTCGTTTGATGAGTAATGCCGGGGAGCTGTTTTCTGATGAGAAGTGGTTAGAAGTGGTTTTTTCACTAAAAGAAGCAGCAAATGCAACACTCCCTAACTTTCAATTCCTTGACAGTGGAGACATTATTACAGGAAATCATGAACATGCTTCAATGGCTGAAGATGACATGGATCCTGCGGAGTCTGGCTCACATGATAGTTTACAAAGCGTGAGGACTCAACATCTTTATGCACATATATCTGATGCAAAGTGCCGAGCTGCTGTTCAGCTTTTATTGATCCAGGCGGTGATGGAGATCTATAACATGTACCGATCTCAGCTTTCAGCAAAAGCTATACTAGTCTTGTTTGAGGCTTTGCATGACGTGGCATTACATGCTCACAAGATTAACAGCAATCTTATTTTACGTTCAAAGTTACAAGAGTATGGCTCTATGACTCAAATGCAAGACCCTCCACTGTTACGCCTGGAGAATGAGTCCTACCAAATATGCCTCACATTTTTACAGAACCTTGTTGAGGACACGCCTCCTAATTATGAGGAGGTTGAAGTAGAGACACTTTTTGTTCAGCTTTGTCAGGAAGTCTTGAAGTTTTATGTTGAAGTTGCAGGTTCTGGAACAGTATCTGAATCTTCTAATGGTAGGGAGGTGCATTGGTTAGTTCCTCTAGGGTCTGGGAAGAGGAGAGAATTGTCTGCACGTGCACCACTTGTTGTGGCCTCTTTGCAAGGTATTTGTAATTTGGGAGATACATCTTTGGAGAAGAACCTGGATCATTTTTTCCCTCTTATCACTAGCTTGATAAGTTGTGAACATGGGTCAACTGAGATTCAGGTAGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCTCTTCTGCTACGCACATGTTAA 5352 0.4383 MASSEADSRLKQVLVPALEKIIKNASWRKHAKLAHECKSVIEILTSPPKPQSPASDDAAEPEASIPGPIHDGGPVEYSLAESESILRPLIAAAGSGVLKIADPAVDAVQRLIAHGFLRGEADSSGGAPEAKLLASLIEAVCKCHEFGDDAVELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLDSKNLVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMDPVEKSDADNSMTQSVQGFITKIVQDIDGVLNPVAPSSLGAHDGAFETTVAATVEAANPADLLDSTDKDMLDAKYWEISMYKTALEGRKEELVDGEVVERDDDLEIQIGNKLRRDAFLVFRALCKLSMKTPTKEASVDPQLMKGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCDDSQILVDIFINYDCDVNSTNIFERMVNGLLKTAQGVPPGATTTVLPPQEETLKLEAMKCLVAVLKSMGDWMNKQLRIPDPLSGKKVEAVDNDHEAGVPPTANGNGEEPADGSDTQSEISNETSEVSTIEQRRAYKLKLQEGISLFNRKPKKGIEFLINANKVGNSPEEIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGLEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSADDFIKNNRGIDDGKDVPEEYLRSLYERISRNEIKMKDVDLETQQIQAVNSNRLLGLDSILNIVIRKRGEDSNMETSNDLIRHMQEQFKEKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEFTIALCLEGFRYAIHVTSVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKVIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQSKSTILPVLKKKGPGRMQYAAATVMRGSYDSTGIGSNTSGAVTSEQVNSLVSNLNMLEQVGSSEMSRIYTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLSFEIMEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAIAFLRFCATKLAAGDLGSSSRNSDKETYGKVSTPSPRTGKEGKQENGEVTEKDDHLYFWFPLLAGLSELSFDPRSEIRQSALKVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGNSSEVNESESDGQLDQDAWLYETCTLALQLVVDLFVNFYNTVNPLLRKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVFSLKEAANATLPNFQFLDSGDIITGNHEHASMAEDDMDPAESGSHDSLQSVRTQHLYAHISDAKCRAAVQLLLIQAVMEIYNMYRSQLSAKAILVLFEALHDVALHAHKINSNLILRSKLQEYGSMTQMQDPPLLRLENESYQICLTFLQNLVEDTPPNYEEVEVETLFVQLCQEVLKFYVEVAGSGTVSESSNGREVHWLVPLGSGKRRELSARAPLVVASLQGICNLGDTSLEKNLDHFFPLITSLISCEHGSTEIQVALSDMLSLSVGPLLLRTC 1783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01066 1783 MobiDBLite consensus disorder prediction 573 607 - -
Viun5g01066 1783 MobiDBLite consensus disorder prediction 588 607 - -
Viun5g01066 1783 MobiDBLite consensus disorder prediction 1305 1329 - -
Viun5g01066 1783 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 690 808 - -
Viun5g01066 1783 Gene3D - 595 688 - -
Viun5g01066 1783 Pfam BIG2 C-terminal domain 1574 1772 IPR046455 -
Viun5g01066 1783 Pfam Domain of unknown function (DUF1981) 1166 1248 IPR015403 -
Viun5g01066 1783 SMART sec7_5 612 797 IPR000904 GO:0005085|GO:0032012
Viun5g01066 1783 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 69 1648 - -
Viun5g01066 1783 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 216 IPR032629 -
Viun5g01066 1783 SUPERFAMILY Sec7 domain 612 805 IPR035999 GO:0005085|GO:0032012
Viun5g01066 1783 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 598 688 - -
Viun5g01066 1783 ProSiteProfiles SEC7 domain profile. 608 795 IPR000904 GO:0005085|GO:0032012
Viun5g01066 1783 MobiDBLite consensus disorder prediction 45 73 - -
Viun5g01066 1783 MobiDBLite consensus disorder prediction 1305 1338 - -
Viun5g01066 1783 Pfam Sec7 domain 616 797 IPR000904 GO:0005085|GO:0032012
Viun5g01066 1783 SUPERFAMILY ARM repeat 379 1512 IPR016024 -
Viun5g01066 1783 Pfam C-terminal region of Mon2 protein 1347 1409 IPR032817 -
Viun5g01066 1783 CDD Sec7 615 797 IPR000904 GO:0005085|GO:0032012
Viun5g01066 1783 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 344 502 IPR032691 -
Viun5g01066 1783 Gene3D - 689 809 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01066 Viun-Chr5 7401798 7415497 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01066 K18442 - gmx:100789988 3263.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01066 5 7401798 7415497 Viun5g01066 5 7401798 7415497 ECH
Viun5g01066 5 7401798 7415497 Viun10g01664 10 31506081 31519531 PCT