Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01664 ATGGCTTCTTCGGAAGCCGATTCCCGTCTGAGGCTGGTCGTGGTACCCGCGCTTGAGAAGATAATCAAGAACGCGTCGTGGCGGAAGCATGCCAAACTCGCACATGAGTGCAAATCCGTCATTGAGAGGCTCGGCCACCAGCACCAGCATTTTCCGACGCCGGGATCTCCGTCCGACAACGAGCCGGAGACCTCCGTCCCTGGTCCGCTCCATGATGGAGGTCCGGTGGAGTTCTCCCTGGCAGAGTCCGAGTCGATCCTCACGCCTCTCATCAATGCTGCCGGCTCCGGCGTCCTCAAGATCGCTGATCCCGCCGTCGATGCCATCCAGAAGCTCATTGCGCATGGATTCATCCGCGGCGAGGCGGACCCGGCCTCCTCTGCTTCGGCGCCGGAGGCGAAGCTCCTGGCCAAGCTTATTGAATCGGTCTGCAAATGCCACGATTTGGGCGACGAGGCGATGGAGTTGCTGGTCCTCAAGACCATGCTCTCTGCCGTGACGTCAATTTCGCTCCGCATCCATGGTGATTCCTTGCTTCTCATTGTGCGGACCTGCTACGATATATATCTGCTGAGCAAGAATGTGGTGAATCAGACGACGGCGAAGGCGTCGCTGATCCAAATGCTGGTGATCGTGTTCCGCCGCATGGAGGCGGATTCCTCGACTGTGCCGGTTCAGCCGATCGTAGTGGCGGAATTGATGGAGCCTGTGGAGAAATCCGATGAAGACAATTCAATGACGCTGTTTGTGCAGGGCTTTATAACGAAGATAATGCAGGACATTGACGGCGTTTTGAACCCTACGACGCCGAGCGGGAAGGTTAGTTTGCTAGGTGGGCACGACGGTGCGTTTGAGACCACCACGGTGGAGACTACGAACCCTACTGATTTGTTGGATTCTACTGATAAAGACATGTTGGATGCTAAGTATTGGGAGATTAGTATGTATAAGACGGCGTTAGAGGGACGGAAGGGGGAGCTTGTGGATGGGGAAGTGGTGGAGAGGGACGATGATTTGGAGGTTCAGATTGGGAATAAGTTGAGGAGAGATGTTTTGGTGTTTAGGGCGCTTTGTAAGTTATCCATGAAGACGCCTCCGAAGGAAGCGGTAGGGGACCCGCAGTTGATGAAGGGGAAGATCGTTGCTCTGGAGTTGCTCAAGATTTTGCTGGAGAATGCTGGGGCTGTGTTCAGGACTAGTGACAGGTTTTTAGGTGCCATCAAACAGTACTTATGTTTATCCTTGTTGAAGAACAGTGCTTCAACTCTTTTAATTGTATTTCAGCTGTCGTGCTCCATTTTTATCAGTCTGGTGTCAAGATTTAGAGCTGGATTGAAAGCAGAAATTGGAGTATTTTTCCCTATGATTGTTCTCAGGGTCCTAGAAAATGTTTCTCAGCCTAATTTTCAGCAGAAGATGATAGTGCTTCGATTTCTGGAAAAGCTCTGTGTTGATTCACAGATATTGGTTGACATATTTATTAACTATGACTGTGATGTCAATTCATCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTGCCCCCTGGTGTACCAACCACGCTTTTGCCACCCCAGGAAGCAACACTAAAACTTGAAGCCATGAAAGGCTTGATTGCAGTTCTAAAATCAATGGGGGACTGGATGAACAAACAATTGCGCATTCCTGATTCTCGTTCAGCCACGAAAGTTGAAGCATTGGATGACAGCCCTGAAACTGGAGGTTTTACCATGGTAAATGGGAATGGAGAAGACCCTCCTGATGGATCTGACACTCAATCAGAAGTCTCCAATGATGCTTCTGATGTTTCAAATATTGAGCAACGCCGGGCTTATAAACTGGAACTCCAGGAAGGTATATCACTTTTCAATAGGAGGCCTGAGAAAGGAATTGAATTTCTCATCAATGCCAACAAGGTGGGTGATTCACCAAAGGATATAGCTGCTTTTCTTAAAGAAGCATCTGGGTTGAACAAGACTATGATTGGTGATTATCTGGGAGAAAGAGAAGATTTACCCTTGAAGGTAATGCATGCCTATGTGGATTCCTTTAACTTTCAAGATATGGAGTTTGACGAGGCAATCAGGGTCTTTCTTCAAGGATTTAGACTGCCTGGTGAGGCACAGAAAATTGATAGGATCATGGAAAAGTTTGCTGAACGTTACTGCAAATGTAATCCAAAGGCCTTTTCTAGTGCTGACACTGCTTATGTCCTTGCCTATTCTGTTATAATGCTTAATACCGATGCTCACAATCCCATGGTGAAGAATAAGATGTCTCATGATGATTTCATAAGAAATAATCGTGGCATTGACGATGGAAAAGATCTACCTGAGGAATACTTGAAGTCCTTGTTTGACAGAATATCTAGAAATGAAATCAAAATGAAAGAAAATGATGAGGCTCCTCAACAAAAACAGGTTGTGAGCCCTAATCGACTATTAGGCTTGGATAGTATATTGAATATTGTGATCCGTAAACGTGTTGAAGAGAATCTGGAGACCAGTGATGATCTTATCCGTCATATGCAAGAACAATTCAAAGAAAAAGCTCGCAGATCTGAATCAATTTATTATGCTGCCACAGATGTTGTAATCCTGAGATTCATGATTGAGGTGTGCTGGGCACCTATGTTGGCCGCCTTTAGTGTTCCTCTTGATCAAAGTGACGATGAGGTTTTAATATCTCTCTGTCTTGAAGGCTTCCGCCATGCTATTCATCTTACTTCAGTAATGTCGATGAAGACTCACAGAGATGTTTTTGTGACGTCATTAGCAAAGTTTACCTCACTACATTCACCAGCTGACATTAAGCAGAAAAATATAGATGCAATTAAGGCAATAGTTGTTATTGCTGATGAAGATGGAAATTACTTACAAGAAGCTTGGGAGCATATCTTGACTTGTGTTTCTCGGTTTGAGCATTTACATCTTCTTGGAGAAGGGGCTCCACCAGATGCCACATTTTTTGCTTTTCCTCAGAATGATTCAGAAAAAACAAAGCAAGCCAAGTCAACCATTCTTCCTGTTTTGAAGAAGAAGGGAATTGGGAGGATGCAGTATGCAGCTGCTTCATTGATGCGGGGTTCATATGATAGTGGTGGAATTGGTAGTAATGGTTCTGGAGTCACTTCAGAACAGGTGAACAATCTTGTTTCTAATTTAAATATGTTGGAACAAGTTGGAAACTCTGAAATGAGCCGCATATTCACTCGGAGTCAGAAGTTGAACAGTGAGGCCATATTAGATTTTGTTAAGGCTCTGTGCAAGGTCTCCATGGAGGAACTGAGGTCTCCATCTGATCCACGTGTTTTCAGCCTTACAAAGATTGTTGAGATTGCGCACTACAATATGAACCGCATAAGGCTTGTGTGGTCAAGCATCTGGCATGTTCTCTCGGATTTCTTTGTAACTATCGGCTGTTCTGCAAACCTTTCAATTGCAATTTTTGCAATGGATTCTTTGCGTCAGTTGTCAATGAAATTTCTGGAGCGGGAAGAGCTGGCTAATTATAATTTTCAAAATGAATTTATGAAGCCTTTTGTCATTGTTATGCGAAAGAGTAGTGCTGTTGAAATTAGAGAGTTAATTATCAGATGTGTCTCTCAAATGGTTCTATCTCGTGTAAACAATGTCAAATCAGGATGGAGGAGCATGTTCATGGTATTCACAACAGCAGCTTACGATGACCACAAAAACATTGTACTCTTGTCTTTTGAAATTATTGAGAAGATTATTCGCGATTACTTCCCTTACATCACTGAGACTGAAACTACAACATTCACAGACTGTGTAAATTGTCTAATCGCGTTTACCAATAGTAAATTCAATAAAGAGATTAGCCTAAATGCCATTGCTTTTCTCCGGTTTTGTGCAACAAAACTTGCAGCGGGGGACCTTTCTGGAAAGGTTTCCCCATCTTCACTTCAAACAGCAAAGGAGGGGGAAAATGATAATGGAGAGGCTGCTGACAAGGATGATCATCTCTATTTCTGGTTTCCTTTATTGGCAGGTTTGTCTGAGCTTAGCTTTGACCCAAGACCTGAGATTAGGAAGAGTGCCTTGGAAGTCCTGTTTGAAACCTTACGTAACTATGGCCATCTCTTTTCGCTAACTTTATGGGAAAGAATATTTGAGTCTGTCTTATTTCCAATATTCGATTATGTTCGACATGGTATTGATCCTTCAGGGAGTTGTTCACCAGCCAATGAAGAAGCGGCAGATCATGGTGAGCTTGGTCAGGATGTTTGGCTTTACGAGACATGCACATTGGCCCTCCAATTGGTTGTAGATCTTTTTGTTAACTTTTACGACACTGTCAATCCACTTTTGAGAAAGGTGCTGATGCTCCTGGTTAACTTCATAAATCGCCCTCACCAAAGCCTTGCTGGCATTGGTATTGCGGCTTTTGTTCGATTGATGACTAATGCGGGGGAGCTATTTTCTGATGAAAAGTGGTTAGAAGTGGTTTTCTCATTAAAAGAAGCAGCAAAGGCAACACTTCCTAACTTTTTGTTTCTGGAAATCGAGGACTTCATTGCAAGTGACGAGGATGCTTCAATCGCTGATGATAGAGATTTTGCTGAATCTGGCTTCCCAGATAATTTGGCACACTTGAGGACTCGTGGTCTTTATGCTCATTTATCTGATGCAAAGTGCCGAGCTGCTGTTCAGCTTTTACTGATTCAGGCGGTGACGGAGATCTATAACATATATCGTTCTCAACTTTCAGCAAAAGCCATGCTAGTCCTATATGATGCGTTGCACGAAATAGCGTTACACGCGCATCGGATTAACAACAATACCATGTTACGTTCAAAGCTCCTAGAGTTTGGTTCTATGAGCCAAATGCAAGACCCTCCACTCTTACGCCTTGAGAATGAATCGTATCAGATCTGCCTTACATTTTTACAGAACCTTGTCATTGACAAGCCTACTAGTTATGAAGAGCAAGAGGTCGAATCTCATCTCATTCAGCTTTGTCAGGAGGTTTTGGAGTTTTATATTGAAGTTGCAGATTTTGGAGTAAAATCTGAATCTTCTAATGGTAGAGCGCCACATTGGTATATTCCCTTGGGCTCCGGGAAGAGTAGAGAATTGGCTTCTCGTTCACCTCTCGTTGTGGCTACTCTGCACGCTATTTGTAGTTTGGGAGATGTTTCCTTTGAGAACAACCTCTCTCATTTCTTCCCTCTTATTTCTAGCTTGATACGCTGTGAGCATGGCTCCAAGGACGTCCAGGTTGCTCTCAGTGACATGCTTACTTTATCAGTTGGTCCTGTTTTGCTACAGTCATATTGA 5319 0.4399 MASSEADSRLRLVVVPALEKIIKNASWRKHAKLAHECKSVIERLGHQHQHFPTPGSPSDNEPETSVPGPLHDGGPVEFSLAESESILTPLINAAGSGVLKIADPAVDAIQKLIAHGFIRGEADPASSASAPEAKLLAKLIESVCKCHDLGDEAMELLVLKTMLSAVTSISLRIHGDSLLLIVRTCYDIYLLSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPVQPIVVAELMEPVEKSDEDNSMTLFVQGFITKIMQDIDGVLNPTTPSGKVSLLGGHDGAFETTTVETTNPTDLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVERDDDLEVQIGNKLRRDAXLVFRALCKLSMKTPPKEAVGDPQLMKGKIVALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASTLLIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVSQPNFQQKMIVLRFLEKLCVDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVPTTLLPPQEATLKLEAMKGLIAVLKSMGDWMNKQLRIPDSRSATKVEALDDSPETGGFTMVNGNGEDPPDGSDTQSEVSNDASDVSNIEQRRAYKLELQEGISLFNRRPEKGIEFLINANKVGDSPKDIAAFLKEASGLNKTMIGDYLGEREDLPLKVMHAYVDSFNFQDMEFDEAIRVFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSHDDFIRNNRGIDDGKDLPEEYLKSLFDRISRNEIKMKENDEAPQQKQVVSPNRLLGLDSILNIVIRKRVEENLETSDDLIRHMQEQFKEKARRSESIYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEVLISLCLEGFRHAIHLTSVMSMKTHRDVFVTSLAKFTSLHSPADIKQKNIDAIKAIVVIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKTKQAKSTILPVLKKKGIGRMQYAAASLMRGSYDSGGIGSNGSGVTSEQVNNLVSNLNMLEQVGNSEMSRIFTRSQKLNSEAILDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSANLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWRSMFMVFTTAAYDDHKNIVLLSFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSKFNKEISLNAIAFLRFCATKLAAGDLSGKVSPSSLQTAKEGENDNGEAADKDDHLYFWFPLLAGLSELSFDPRPEIRKSALEVLFETLRNYGHLFSLTLWERIFESVLFPIFDYVRHGIDPSGSCSPANEEAADHGELGQDVWLYETCTLALQLVVDLFVNFYDTVNPLLRKVLMLLVNFINRPHQSLAGIGIAAFVRLMTNAGELFSDEKWLEVVFSLKEAAKATLPNFLFLEIEDFIASDEDASIADDRDFAESGFPDNLAHLRTRGLYAHLSDAKCRAAVQLLLIQAVTEIYNIYRSQLSAKAMLVLYDALHEIALHAHRINNNTMLRSKLLEFGSMSQMQDPPLLRLENESYQICLTFLQNLVIDKPTSYEEQEVESHLIQLCQEVLEFYIEVADFGVKSESSNGRAPHWYIPLGSGKSRELASRSPLVVATLHAICSLGDVSFENNLSHFFPLISSLIRCEHGSKDVQVALSDMLTLSVGPVLLQSY 1773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01664 1773 Coils Coil 833 853 - -
Viun10g01664 1773 ProSiteProfiles SEC7 domain profile. 612 799 IPR000904 GO:0005085|GO:0032012
Viun10g01664 1773 Gene3D - 604 693 - -
Viun10g01664 1773 SUPERFAMILY Sec7 domain 616 808 IPR035999 GO:0005085|GO:0032012
Viun10g01664 1773 Pfam BIG2 C-terminal domain 1564 1761 IPR046455 -
Viun10g01664 1773 Pfam C-terminal region of Mon2 protein 1338 1398 IPR032817 -
Viun10g01664 1773 MobiDBLite consensus disorder prediction 44 76 - -
Viun10g01664 1773 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 73 1638 - -
Viun10g01664 1773 MobiDBLite consensus disorder prediction 566 611 - -
Viun10g01664 1773 SMART sec7_5 616 801 IPR000904 GO:0005085|GO:0032012
Viun10g01664 1773 Pfam Dimerisation and cyclophilin-binding domain of Mon2 6 219 IPR032629 -
Viun10g01664 1773 MobiDBLite consensus disorder prediction 593 611 - -
Viun10g01664 1773 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 348 506 IPR032691 -
Viun10g01664 1773 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 602 692 - -
Viun10g01664 1773 CDD Sec7 619 801 IPR000904 GO:0005085|GO:0032012
Viun10g01664 1773 Pfam Sec7 domain 620 801 IPR000904 GO:0005085|GO:0032012
Viun10g01664 1773 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 694 812 - -
Viun10g01664 1773 Gene3D - 694 815 IPR023394 -
Viun10g01664 1773 Pfam Domain of unknown function (DUF1981) 1168 1250 IPR015403 -
Viun10g01664 1773 SUPERFAMILY ARM repeat 383 1504 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01664 Viun-Chr10 31506081 31519531 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01664 K18442 - gmx:100798955 3117.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01066 5 7401798 7415497 Viun10g01664 10 31506081 31519531 PCT