Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00854 ATGAATGTGGAAGTGGAGAAAAAGACGCTATCTGAAGAAAAATATGGCAGGGTTGAATCTGTCATAAGGTGGTTGGTGGTGGTTGTGTTTGTGGGATGGATTTTCGTGTGGATAATGACTCCCACAAACACTTACCAGCAAAAATGGAAGCATCGTCTTCAAGAAAAGACTGAATCTGTTTTTGGTGCACAAGGTGCAAGGCTTCTGGTTTACACTTGTCCAATCTTGTTCATAGCTGCTTTGGGATGTGTCTACGTCCACATAGTCAAAAAAGGAAAGGGTTCCAACATGGAAAAAAGAAAGAAACACGAGGTATCCATATGGAAGCGTTTGGTGCTTGTGAGAGGTCCTCTTGGCATAGTTTCTGTCACAGAACTGGCCTTCTTGTCTATGTTCATTGTTCTCCTCTTATGGTCCTTTTCAATCTATCTGCACAATGGCTTTGCCAAAATCACCCACAAATTAGCAGCAGAACAAGGTGTAAAACTCTGGGAGAAGAGACTAGCTAGTGCAGCTGTGAAGTTGGGTTTGGTTGGGAACATATGTTTGGCATTCTTGTTTTTCCCAGTTGTTCGTAGTTCCTCAGTGCTACCATTACTTGGACTAACACAAGAGAGTTGCATCAAATACCATATTTGGCTAGGACACATTGCCATGACCCTTTTCACTGCTCATGGTATTCTTTTCATTATCTATTGGGCACTTACTCATCAACTTTCAAAGATGCTGGAATGGAAAAGAATAGGGATTTCAAATGTAAGTGGAGAGGTATCTCTGGTTGCTGGTTTGTTGATGTGGATTGCAGCAATCCCTCGTATTAGGCGTAAAGCTTTTGAGGTCTTCTTCTACACTCACTACCTCTACATCCTCTTCATTGTCTTCTTCATTTTTCACGTTGGCTTCTCCTATGCATGCACCATGCTCCCAGCTTTCTACCTCTTCTTAGTTGATCGCTACCTAAGGTTTCTGCAATCAAGATACCAAGTTCCTTTGATTTCTGCTCGTGTTTTGCCTTGTAAAACTCTACAACTCAACTTCTCCAAGACCCATGGTTTAACTTATAGTCCTACAAGTATTATGTTCATAAATATACCAAGCATATCGAAGCTACAGTGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAGAAGTGTTGAGTGTTGTTATCAAAAGTGAAGGAACTTGGTCCCAGAAACTCTACCAGATGCTCTCAACCCCTTCAGCAATTGATCATCTCAGTGTCTCTGTTGAAGGTCCATATGGACCTGCATCAACCAACTATCTGAGGTATGACACTCTTGTGATGGTTAGTGGAGGGAGTGGAATCACCCCCTTTATCTCCAACATTCGGGAGCTAATGTATTTGAACACAGCATTCATATGCAGAACCCCAAAAGTTATCCTAATATGTGCATTCAAGAACTCTTCCTATCTCTCAATGCTGGATCTGATCCTTCCAAATTCTGGCACCCCATTTGATATTTCTAACATGCAACTACAAATTGAGGCCTACATCACAAGAAAGGAAGAGCATGAATTGGAAAGTCAAACTCACCTTCAAGATATAAGGTTCAAACCCAAGGCAACAGATGCACCCATATCTGCTATTTTAGGTCCTAACAGTTGGCTATGGCTTTGTGCTATAATCTCATCCTCGTTCATTATTTTCCTTGTCCTAATTGGGATCATTACACGATACATCATTTTCCCTGTAGAATACAATTCTAATAAAATATTTTCACAATCTTTGGGGTCATTCCTCAGCATGTTAGCCATATGTGTGTCCATAACAATGGCTGCTAGTGTAGCTGTTGTTTGGAACAAGAAACACAACGATATAGAAGCAAAGCAGATTCAGAACTTAGAAGGGTCATCATCAGAGGTGAATGTTAATGGAGGAGATAAAGAAGTTGAAAGCCTACCCCACCAATTCCTTGTTCAAGCTACAAAAGTGCATTTTGATGTAAGACCTGATCTGAGAAGAATGCTAATGGAAGTTGAAGGAACAAGAGTTGGAGTTTTTGTTTCGGGACCCAAGAAGATGAAGCAGGAGGTTGCAGCCATTTGTTCGTCTGGTTTAGCAGAAAATCTCCATTTTGAGTCTTATAGCTTTAGCTGGTAA 2130 0.4085 MNVEVEKKTLSEEKYGRVESVIRWLVVVVFVGWIFVWIMTPTNTYQQKWKHRLQEKTESVFGAQGARLLVYTCPILFIAALGCVYVHIVKKGKGSNMEKRKKHEVSIWKRLVLVRGPLGIVSVTELAFLSMFIVLLLWSFSIYLHNGFAKITHKLAAEQGVKLWEKRLASAAVKLGLVGNICLAFLFFPVVRSSSVLPLLGLTQESCIKYHIWLGHIAMTLFTAHGILFIIYWALTHQLSKMLEWKRIGISNVSGEVSLVAGLLMWIAAIPRIRRKAFEVFFYTHYLYILFIVFFIFHVGFSYACTMLPAFYLFLVDRYLRFLQSRYQVPLISARVLPCKTLQLNFSKTHGLTYSPTSIMFINIPSISKLQWHPFTITSNSNLEPEVLSVVIKSEGTWSQKLYQMLSTPSAIDHLSVSVEGPYGPASTNYLRYDTLVMVSGGSGITPFISNIRELMYLNTAFICRTPKVILICAFKNSSYLSMLDLILPNSGTPFDISNMQLQIEAYITRKEEHELESQTHLQDIRFKPKATDAPISAILGPNSWLWLCAIISSSFIIFLVLIGIITRYIIFPVEYNSNKIFSQSLGSFLSMLAICVSITMAASVAVVWNKKHNDIEAKQIQNLEGSSSEVNVNGGDKEVESLPHQFLVQATKVHFDVRPDLRRMLMEVEGTRVGVFVSGPKKMKQEVAAICSSGLAENLHFESYSFSW 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00854 709 Gene3D - 580 708 IPR039261 -
Viun5g00854 709 CDD NOX_Duox_like_FAD_NADP 331 510 - -
Viun5g00854 709 PANTHER NADPH OXIDASE 22 707 - -
Viun5g00854 709 SFLD Ferric Reductase Domain 41 709 - -
Viun5g00854 709 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 417 487 IPR039261 -
Viun5g00854 709 SFLD Ferric reductase subgroup (FRE) 18 709 - -
Viun5g00854 709 Pfam FAD-binding domain 328 427 IPR013112 GO:0016491
Viun5g00854 709 Gene3D - 417 541 IPR039261 -
Viun5g00854 709 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 324 429 IPR017927 GO:0016491
Viun5g00854 709 Coils Coil 497 517 - -
Viun5g00854 709 FunFam Ferric reduction oxidase 3 422 539 - -
Viun5g00854 709 Pfam Ferric reductase like transmembrane component 175 295 IPR013130 -
Viun5g00854 709 Pfam Ferric reductase NAD binding domain 433 693 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00854 Viun-Chr5 5360004 5363517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00854 2 709 Miscellaneous Gene Families AT1G01580 53.984 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00854 K00521 - gmx:100814642 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00854 5 5360004 5363517 Viun5g00854 5 5360004 5363517 ECH
Viun5g00854 5 5360004 5363517 Viun10g01946 10 34154027 34158318 PCT