Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01946 ATGGCTCAAGAAACTGTGGTGAAGGTGAAGAGTTCACCCTCTCAAGCAAAATTTCACAGGGTTCAATTTGCAATAAGGTTGTTGGTACTGGTTTTGTTCTTGGGTTGGATTTTCATATGGATAATGTCTTCCACAAATACTTTTAGACAAAGATGGCTTCCTATATACAAAGCAAAGACTAACAATACAACTTATTTGGGTTCAAAAGGTGCTTATCTTCTGATGTACACATTCCCAATGTTGCTCATAGCTACTTTGGGGTGTGTCTACCTCCACATAATCAAAAAAGCAAATGACTCCAACATGGAAAGCAGCAACTCAAAGAAACTTGAGGTAGCCCTATGGAAGCGTCCAGTGCTTATAAAAGGCCCTCTCGGCATTGTCTCTGGCACAGAGTTTGCATTCTTTCTCATGTTCATTGCACTCCTAGTCTGGTCCTATGCAATTTCTTTAAGAAACAAATTTGCAAGAATCACCCCTGAATCAGCAGCACAGGATGGCGAGAAAATATGGGAAGAGAAGCTAGACGCTGCTGGATTAATGCTTGGTGTTGTTGGGAACATGTGTCTGGCATTCATGTTTTTTCCTGTGGCTCGTGGTTCAAGCTTGTTGCCACTGTTTGGCCTCACTTCTGAGAGTTGCATCAAGTACCATATTTGGCTTGGACATATTGCCATGCTACTCTTCACTGCTCACGGTTTCAGCTTCATCATCCATTGGGCAATCATTAATCACATGTCTGCGATGCTGGAATGGAAGAAAAACGATATATCAATTGTGGCCGGAGAGATATCTTTACTTTCTGGTTTGCTGCTATGGATTGCAACCATTCCCCGCATCAGGCGAACATATTTTGAGCTCTTCTATTACGCTCATCACCTCTACATCCTCTTCATAGTCTTCTTCGTCTTTCATGTTGGCATTTCCTATACCTTCATTATGCTCCCTGGTTTCTACCTCTTCATGGTTGATCGTTACTTAAGGTTTCTGCAATCAAGACGCCAAGTTCGTCTGGTTTCTGCTCGGGTTTTGCCTTGTGAAGCTGTAGAACTCAACTTCTCCAAGGGCCATGAATTAACTTATAACCCCACAAGTGTGATGTTCATAAATGTACCAAGCATATCCAAGCTGCAGTGGCATCCATTTACTGTTACTTCTAATAGTAATTTGGAGGGAGACAAGCTAAGTGTTGTTATTAAAAGTGAAGGACCTTGGACCAAGAAGCTATACCAGTTGCTTTCAACTCCTTCCACCATAGATCACCTTTCTGTGTCTGTCGAAGGTCCTTATGGACCTGCTTCAACCAACTATCTACGGCATGACAGTCTTGTGATGGTGAGTGGAGGAAGTGGCATCACACCTTTTATATCCATCATTCGGGAGCTAATATATCTGAACACTGCATTCAAATGCAAAACCCCGAAAGTCTTCCTAATTTGTGCCTTCAAGAACTCTTCTTCTCTGTCAATGCTAGAGTTGATCCTCCCAATAAATGGCACCCCTTCTGATATTTCTAATTTGGAATTGCAAATTGAGGCCTACATCACAAGGGACAAGGAGCCTAAAGCAGATGACCCTATTCACCCTCAAATCAGATGGTTCAAGCCAAATCCATCTGATGAACCAGTGCACGCGACATTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATTTCATCCTCCTTCGTCATTTTCCTTATCTTAATAGGGATCATTACCCGTTACTACATTTTCCCTATTGATCATAACTCAAATCAAATATTCTCCTACCCTTTGAATGCATTCCTTAACATGCTAGTAATATGTGTGTCCATAGCAAGTGTTTGTACTGCTGCTTTTCTTTGGAACAAGAAATATTATGCTAGACAAGGAAAGCAGATTCAGAACATGGAAGGGTCTACACCAACAGTGTCGCCAAACTCCATGGTTTACAATGTAGATAGAGAACTGGAAAGTCTTCCATATCAGTCACTTATTCACGCCACCAATGTGCATTATGGTGTAAGACCTGACCTAAGAAGGATCCTATTTGAACACAAAGGGTCAAGTGTGGGAGTTCTTGCTTCAGGACCCAAAACAATGAGGCATGAGGTTGCAGCCATTTGCTCCTCATCTGGTTTAGCCGAGAATCTGCATTTTGAGTCTATTAGCTTTAGCTGGTGA 2166 0.4206 MAQETVVKVKSSPSQAKFHRVQFAIRLLVLVLFLGWIFIWIMSSTNTFRQRWLPIYKAKTNNTTYLGSKGAYLLMYTFPMLLIATLGCVYLHIIKKANDSNMESSNSKKLEVALWKRPVLIKGPLGIVSGTEFAFFLMFIALLVWSYAISLRNKFARITPESAAQDGEKIWEEKLDAAGLMLGVVGNMCLAFMFFPVARGSSLLPLFGLTSESCIKYHIWLGHIAMLLFTAHGFSFIIHWAIINHMSAMLEWKKNDISIVAGEISLLSGLLLWIATIPRIRRTYFELFYYAHHLYILFIVFFVFHVGISYTFIMLPGFYLFMVDRYLRFLQSRRQVRLVSARVLPCEAVELNFSKGHELTYNPTSVMFINVPSISKLQWHPFTVTSNSNLEGDKLSVVIKSEGPWTKKLYQLLSTPSTIDHLSVSVEGPYGPASTNYLRHDSLVMVSGGSGITPFISIIRELIYLNTAFKCKTPKVFLICAFKNSSSLSMLELILPINGTPSDISNLELQIEAYITRDKEPKADDPIHPQIRWFKPNPSDEPVHATLGPNSWLWLGAIISSSFVIFLILIGIITRYYIFPIDHNSNQIFSYPLNAFLNMLVICVSIASVCTAAFLWNKKYYARQGKQIQNMEGSTPTVSPNSMVYNVDRELESLPYQSLIHATNVHYGVRPDLRRILFEHKGSSVGVLASGPKTMRHEVAAICSSSGLAENLHFESISFSW 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01946 721 Pfam Ferric reductase like transmembrane component 182 302 IPR013130 -
Viun10g01946 721 SFLD Ferric reductase subgroup (FRE) 22 721 - -
Viun10g01946 721 Pfam FAD-binding domain 335 434 IPR013112 GO:0016491
Viun10g01946 721 Gene3D - 424 546 IPR039261 -
Viun10g01946 721 Pfam Ferric reductase NAD binding domain 440 704 IPR013121 GO:0016491
Viun10g01946 721 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 424 494 IPR039261 -
Viun10g01946 721 SFLD Ferric Reductase Domain 47 721 - -
Viun10g01946 721 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 331 436 IPR017927 GO:0016491
Viun10g01946 721 FunFam Ferric reduction oxidase 3 429 546 - -
Viun10g01946 721 CDD NOX_Duox_like_FAD_NADP 338 517 - -
Viun10g01946 721 PANTHER NADPH OXIDASE 27 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01946 Viun-Chr10 34154027 34158318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01946 11 721 Miscellaneous Gene Families AT1G01580 55.710 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01946 K00521 - gmx:100790114 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00854 5 5360004 5363517 Viun10g01946 10 34154027 34158318 PCT