Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00851 ATGTCCACCATGAAAAACAACCTCAAGGATCAAGAACACTACTTCCACTCTTCATGGACCATAGCAAAACTAATCACCTCCTTCTTCCTCTTGGTTTCCATCTCCTACCTCTTCTACTCCCTTGGATTCATCACTCATTCAAACGATTGTCCTCCAAAAAAGCCTTACCCTCTTCCCACCACCACACTCGTTTCCACCACCACTCCTCCACCACCTCAACACACACCAAAACCCTCCGAAAAAACCAACATTTCCCACATAGTGTTTGGCATAGGAGCCTCTTCCAGGCTCTGGAGCCAAAGAAAAGAGTACATCAAGCTGTGGTGGAGGCCAAAAGAAACAAGGGGAATAGTGTGGCTGGACCAAGAAGTGAAAACCGAAGCCGGTGATGAGACCCTCTTGCCAACATTGAGAATATCGAGTGATGTCTCAAAGTTCAAGGTGAAGAATCCACGTGAGGAGTTGGGGGTTCGCATATCTCGAATTGTGTCGGAGACAGTGAGGCTTGGGATGGAGAATGTGAGGTGGTTTGTGATGGGAGATGATGACACTTTCTTTGTGACTGAGAATTTGGTGAAGGTGCTGCAGAAGTATGATCACAACCAGTTCTATTACATAGGAGCCAATTCAGAGAGCCACTTGCAGAACATTCACTTTTCCTATAACATGGCTTATGGGGGTGGAGGTTTTGCCATAAGCTACCCTTTGGCTGTGACATTGGAGAGAATGCAGGACCAGTGTCTTCAGAGGTACCCTGCATTGTTTGGTTCAGATGATAGAATCCAGGCTTGTATGGCAGAGCTCGGTGTTCCTCTCACCAAGGAAATTGGCTTTCACCAGTTTGATGTATATGGCAGCGTGTTTGGGCTCTTAGCAGCGCATCCCGTTACACCTTTAGTTTCGATGCATCACTTGGACGTGGTTGAGCCCATATTCCCGAACGTGAACCGTGTGGAGGCCCTGCAGAAGCTTATTGGGCCCATGAGACTGGACTCGTATGGGCTCATGCAGCAATCCATATGCTACGACAAAGCCCGGCACTGGACCGTATCCGTTTCATGGGGCTATGCGGTTCAAATATTCCGGGGCATTTTCTTGGCCCGGGACATGGAGATGCCGGGCAGAACCTTTCTGAATTGGATCCGGCGGGCGGATTATACCGGATTTCCGTTCAACACGCGCCCTTTCAGCCGGAATGCTTGCCTGAAACCTTTTGTTTTCTACTTGGATAACGCCATCTACGATGGGGTTGCTGATGAGACTGTCAGTGACTATGTTCGGGTCCAGCCCAACCCGGATTGCAGGTGGAAAATGCCGGATCCGACCCAAATCTCAATGATTAGGGTTTATAAGAAACTCGATTCGCATTTGTGGGACAAGTCTCCGAGGAGAAATTGTTGCAGGTTTCGACCAACAGAGGAAGAAGGAACTATGGTGATTGAAGTGGGAGAATGCAGAAAAGATGAATTCAGCTCATAA 1479 0.4834 MSTMKNNLKDQEHYFHSSWTIAKLITSFFLLVSISYLFYSLGFITHSNDCPPKKPYPLPTTTLVSTTTPPPPQHTPKPSEKTNISHIVFGIGASSRLWSQRKEYIKLWWRPKETRGIVWLDQEVKTEAGDETLLPTLRISSDVSKFKVKNPREELGVRISRIVSETVRLGMENVRWFVMGDDDTFFVTENLVKVLQKYDHNQFYYIGANSESHLQNIHFSYNMAYGGGGFAISYPLAVTLERMQDQCLQRYPALFGSDDRIQACMAELGVPLTKEIGFHQFDVYGSVFGLLAAHPVTPLVSMHHLDVVEPIFPNVNRVEALQKLIGPMRLDSYGLMQQSICYDKARHWTVSVSWGYAVQIFRGIFLARDMEMPGRTFLNWIRRADYTGFPFNTRPFSRNACLKPFVFYLDNAIYDGVADETVSDYVRVQPNPDCRWKMPDPTQISMIRVYKKLDSHLWDKSPRRNCCRFRPTEEEGTMVIEVGECRKDEFSS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00851 492 MobiDBLite consensus disorder prediction 55 81 - -
Viun5g00851 492 Pfam Protein of unknown function, DUF604 215 467 IPR006740 -
Viun5g00851 492 FunFam Fringe-related protein-like 74 329 - -
Viun5g00851 492 Gene3D - 74 328 - -
Viun5g00851 492 PANTHER FRINGE-RELATED 18 489 - -
Viun5g00851 492 MobiDBLite consensus disorder prediction 55 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00851 Viun-Chr5 5348343 5350777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00851 21 487 Glycosyltransferase AT5G41460 57.959 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00851 - - gmx:100777888 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00851 5 5348343 5350777 Viun10g01951 10 34231110 34234357 PCT