Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g01951 ATGTCCATCATGAAGAACAATTTCAAAGACCCTGACCATTTATACTCTCCATGGAGCTTCTCAAAGCTCATGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTCAGATTCGTCAGCCACACCTACGACTGTGATCAACCACCACCCCACATTCCCACCGTCACTCACCGTCACACATCCAACAACCCCCCACCGCCGGAACAAAAGACTCCGCCTTTCGAACAAACCAACCTTTCCCACATAGTGTTCGGCATAGGGGCCTCGGCGAAGCTCTGGAAGCAGCGAAAAGAGTACATCAAGATGTGGTGGAGGCCCAATGAGATGCGTGGAGTCGTGTGGTTGGAGCAGAGGGTGAAGACCGAACCCGGCGATGAAAATTCCTTGCCCTTGTTGAGGATCTCCGGTGACACTTCCCGGTTCAAGTATAGGAATCCGAAGGGGCATAGATCGGCGATTAGAATCTCGCGCATAGTGTCTGAGACTCTGAGGCTTGGGATGAAGGATGTGAGGTGGTTTGTGATGGGGGATGACGACACCGTTTTTGTTGCAGAAAATCTGGTGAAGGTTTTGCAGAAGTATGATCATAACCAGTTCTATTACATTGGGAGTTCTTCAGAGAGTCACTTGCAGAATATATATTTTTCTTACAACATGGCTTATGGGGGTGGTGGTTTCGCCATTAGTTATCCTCTGGCTGTGGCATTGGAGAAAATGCAAGATAGGTGCATTCAGAGGTACCCTGGTTTATATGGCTCTGATGACAGAATTCAAGCTTGTATGGCAGAATTAGGAGTTCCTCTCACCAAGGAGAAAGGGTTTCATCAGTTCGATGTGTACGGCAATCTGTTTGGGCTTCTGGCGGCCCATCCACTTGCACCGCTGGTGTCACTACATCACCTGGACGTGGTAGAGCCCATATTTCCAAACGTGAGCCGGGTGCGGGCTCTGAAGCGGCTGAGCGGACCCATGAAGCTGGACCCGGCCGGGCTCATGCAGCAATCTATTTGCTACGACAAGGCCCGGACCTGGACCGTATCCGTTTCGTGGGGATACGCGGTTCAAATATTCCGGGGAATTTTCTCGGCCCGGGAAATGGAGATGCCGGCGAGGACGTTTCTCAACTGGTACAGACGCGCCGATTACACGGCGTACCCGTTCAACACCCGCCCCGTCAGCCGCCATGTTTGTCAGAAACCTTTTGTCTATTTCTTGTCAGAGGCGGTGTACGACAGTGCTGCCAATGAAACTTCAAGTTACTATATTCGGGTCCAGCAAAACCCCGATTGCAAGTGGAAAATGGAGGATCCGACCCGGATCAAATCGGTGGAAGTTCGTAAGAAAATTGACCCGCATTTGTGGGATAAGGCTCCGAGAAGAAATTGTTGTAGGGTTCGACGCACGAAGAAGAAAGGAAGTATGGTGATTGATGTTGGGGAATGCAGGGGAGATGAAGTTGTTGAGTTGTAG 1482 0.504 MSIMKNNFKDPDHLYSPWSFSKLMAFFFLLISISYLFYSLRFVSHTYDCDQPPPHIPTVTHRHTSNNPPPPEQKTPPFEQTNLSHIVFGIGASAKLWKQRKEYIKMWWRPNEMRGVVWLEQRVKTEPGDENSLPLLRISGDTSRFKYRNPKGHRSAIRISRIVSETLRLGMKDVRWFVMGDDDTVFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPLAPLVSLHHLDVVEPIFPNVSRVRALKRLSGPMKLDPAGLMQQSICYDKARTWTVSVSWGYAVQIFRGIFSAREMEMPARTFLNWYRRADYTAYPFNTRPVSRHVCQKPFVYFLSEAVYDSAANETSSYYIRVQQNPDCKWKMEDPTRIKSVEVRKKIDPHLWDKAPRRNCCRVRRTKKKGSMVIDVGECRGDEVVEL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g01951 493 MobiDBLite consensus disorder prediction 54 77 - -
Viun10g01951 493 FunFam Fringe-related protein-like 73 329 - -
Viun10g01951 493 Pfam Protein of unknown function, DUF604 215 467 IPR006740 -
Viun10g01951 493 Gene3D - 73 324 - -
Viun10g01951 493 PANTHER FRINGE-RELATED 21 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g01951 Viun-Chr10 34231110 34234357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun10g01951 21 486 Glycosyltransferase AT5G41460 65.849 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g01951 - - gmx:100789583 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g01951 10 34231110 34234357 Viun10g01951 10 34231110 34234357 ECH
Viun5g00851 5 5348343 5350777 Viun10g01951 10 34231110 34234357 PCT