Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00818 ATGTCGAACTTGTTGGACAAAGCTAAAACCTACGTTGCGGACAAAGTGGCGGAAAAAGTGGCGAACATGCCGAAGCCAGAGGCGACGGTGGCCGACGTCGATTTCCAAAAGGTGAGCTGCGACAGCGTCCAGTACTTGGCTAAGGTTTCTGTCTCTAATCCTTATGCCACTCCCCTCCCTATTTGTGAGATCAAGTACTCCCTCAAAAGTGCAGACAGGGAGATAGCATCAGGGATAATACCTGACCCAGGGTCGTTGAAGGCGAAGGACTCGACAATGTTGGATGTGCCGGTGAAGGTGCCTCACACGGTGTTACTGAGCTTGGCAAGGGACATTGGTGCAGATTGGGACATCGATTATCAATTGGATATTTGGCTCATCATTGACCTTCCTGTCGTTGGCGACATCACCATTCCCCTTTCTCAGAAGGGAGAGATCAAGCTCCCAACCATCAGAGACATGTTTGCCAGCAGCTGA 477 0.5073 MSNLLDKAKTYVADKVAEKVANMPKPEATVADVDFQKVSCDSVQYLAKVSVSNPYATPLPICEIKYSLKSADREIASGIIPDPGSLKAKDSTMLDVPVKVPHTVLLSLARDIGADWDIDYQLDIWLIIDLPVVGDITIPLSQKGEIKLPTIRDMFASS 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00818 158 FunFam Desiccation protectant protein Lea14-like 21 155 - -
Viun5g00818 158 Pfam Late embryogenesis abundant protein 48 144 IPR004864 -
Viun5g00818 158 PANTHER - 3 150 IPR045043 -
Viun5g00818 158 SMART why 28 145 IPR013990 GO:0009269
Viun5g00818 158 Gene3D - 21 155 - -
Viun5g00818 158 SUPERFAMILY LEA14-like 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00818 Viun-Chr5 5155868 5157763 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00818 - - vun:114183512 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00818 5 5155868 5157763 Viun5g00818 5 5155868 5157763 ECH
Viun5g00818 5 5155868 5157763 Viun10g02052 10 35481001 35483054 PCT