Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02052 ATGTCGCAGTTGTTGAATAAAGCGAAGAACTTCGTGTCGGAGAAGGTAAACGAGATGGCGAAGCCGGAGGCGAGTGTGAACGACGTGGACTTCAAGCGCGTGAGCAAAGATAGTATGGAGTATTTGGTGAAGGTCGCTGTTCGTAACCCTTATTCAACTCCCATACCCATATGTGAGATCAGCTACTCTTTCAAAAGCGCGTCCAGGGAGATAGCATCAGGAACAATTCCAGACCCAGGATCTTTGAAGGCAAAGGACACGACCATGGTGGATGTGCCAGTTAAGGTTCCTTACAGCATATTAATGTCCTTAGCAAGGGACATTGGTGCTGACTGGGACATCGATTACCAACTGGATCTTCGTCTCGTTATCGACCTTCCTGTCATTGGCAACTTCACCATTCCTCTCTCTCACAACGGAGAGATCAAGCTTCCAACCCTCTCTACCATGTTTGCCTAA 459 0.4793 MSQLLNKAKNFVSEKVNEMAKPEASVNDVDFKRVSKDSMEYLVKVAVRNPYSTPIPICEISYSFKSASREIASGTIPDPGSLKAKDTTMVDVPVKVPYSILMSLARDIGADWDIDYQLDLRLVIDLPVIGNFTIPLSHNGEIKLPTLSTMFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02052 152 SMART why 24 141 IPR013990 GO:0009269
Viun10g02052 152 SUPERFAMILY LEA14-like 2 150 - -
Viun10g02052 152 Gene3D - 17 151 - -
Viun10g02052 152 FunFam Desiccation protectant protein Lea14-like 17 151 - -
Viun10g02052 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Viun10g02052 152 PANTHER - 3 146 IPR045043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02052 Viun-Chr10 35481001 35483054 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02052 - - gmx:547533 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02052 10 35481001 35483054 Viun10g02052 10 35481001 35483054 ECH
Viun5g00818 5 5155868 5157763 Viun10g02052 10 35481001 35483054 PCT