Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00668 ATGGCAACCATGAACCCATTTGATTTGTTGGGTGACGACGCAGAGGACCCTTCTCAGCTCATCGCAGCGGAGCAACTCAAGGCAGCGACAGCGGCTGCGGCGGCCGCGGCGGCTCCCAAGAAGGCGCCTGTTCAGCAAAACAAGCCGGCTCAGCTGCCCACCAAGCCTCCTCCTCCTGCTCAAGCCGTTAGGGAGTCCAGAAATGAGCCGGTTCGTGGAGGCCGTGGAGGTGGACGAGGTGGTGCTCGTGGGTTTGGACGTGGTCGTGGGTTTGGTCGGGACTCTTCCAATGATGAGAACTCATTTCCCGCCACTGGAGCTCCTTACAATTCGGGTTCTTTTGAGGAAGGAGATGCTGGAAAGTCTTCTGAAAGACGTGGTTATGGTGGACCCCGAGCTCCTTACCGTGGTGGTCGTCGTGGAGGTTTTAGCAACGGGGAAGTTGGTGAAGGTGAAGAAGGACGTCCTCGAAGAACATTTGATCGTCGCAGTGGGACGGGCCGAGGAAATGAATTTAAACGTGATGGTGCTGGACGTGGTAACTGGGGAACACAAGATGATGAAATTACTCAGGCAACGGAGGAAGTTGTGAATGAAACTGGAAAGAATTTGGGAGATGAGAAGCCTGCTGCTGAAGAAGTAGCTGATGGAAACAAGGACAATGTTAATGATACTGAAGAGAAAGAGCCTGAAGATAAGGAGATGACTCTTGAGGAATACGAGAAAGTTCTGGAAGAGAGAAGGAAGGCCTTCCAAGCACTCAAGACTGAAGGGAGAAAGGTGGACACTAAAGAGTTTGAATCCATGCAACCCTTATCAAGCAAAAAGGACAATCATGACATATTCATTAAACTGGGATCTGAAAAAGATAAGAGAAAGGAGGCTTTTGAGAAGGAAGAAAAATCCAAGAAGTCTGTTAGCATCACGGAATTCCTGAAGCCTGCTGAAGGGGAAACTTATTACAGCCCTGGTGGACGTGGTAGGGGCCGTGGCCGTGGCACGCGTGGTGGTTTCCGTGGAGGTGTTACCAACAGTGCACCTGCCCCATCCATCGAAGATCCTGGGCATTTCCCAACCTTGGGTGGCAAGTGA 1092 0.5156 MATMNPFDLLGDDAEDPSQLIAAEQLKAATAAAAAAAAPKKAPVQQNKPAQLPTKPPPPAQAVRESRNEPVRGGRGGGRGGARGFGRGRGFGRDSSNDENSFPATGAPYNSGSFEEGDAGKSSERRGYGGPRAPYRGGRRGGFSNGEVGEGEEGRPRRTFDRRSGTGRGNEFKRDGAGRGNWGTQDDEITQATEEVVNETGKNLGDEKPAAEEVADGNKDNVNDTEEKEPEDKEMTLEEYEKVLEERRKAFQALKTEGRKVDTKEFESMQPLSSKKDNHDIFIKLGSEKDKRKEAFEKEEKSKKSVSITEFLKPAEGETYYSPGGRGRGRGRGTRGGFRGGVTNSAPAPSIEDPGHFPTLGGK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00668 363 MobiDBLite consensus disorder prediction 289 307 - -
Viun5g00668 363 MobiDBLite consensus disorder prediction 200 235 - -
Viun5g00668 363 MobiDBLite consensus disorder prediction 262 281 - -
Viun5g00668 363 SMART HABP4_PAI_RBP1_2 156 262 IPR006861 -
Viun5g00668 363 MobiDBLite consensus disorder prediction 184 198 - -
Viun5g00668 363 MobiDBLite consensus disorder prediction 30 235 - -
Viun5g00668 363 MobiDBLite consensus disorder prediction 150 175 - -
Viun5g00668 363 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 362 IPR039764 GO:0003723
Viun5g00668 363 Gene3D - 154 265 - -
Viun5g00668 363 Pfam Stm1 1 77 IPR019084 -
Viun5g00668 363 MobiDBLite consensus disorder prediction 289 363 - -
Viun5g00668 363 Pfam Hyaluronan / mRNA binding family 156 261 IPR006861 -
Viun5g00668 363 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00668 Viun-Chr5 4141541 4146448 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00668 K13199 - gmx:100814825 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00668 5 4141541 4146448 Viun5g00668 5 4141541 4146448 ECH
Viun10g00150 10 950484 954399 Viun5g00668 5 4141541 4146448 PCT