Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g00150 ATGGCCACTGCCAATCCCTTTGATTTATTGGGCGACGATGCGGAGGACCCGTCGCAGTTGATCGCGGCCGAGCAGTTGAAGGCCGCCGCCGCACCGAAGAAGGAGCAGGGCAAGCCTGGACCCCGCGGTGGTGCGGTAGCGCAGCAGAGCAAGCCGGCTCAGTTGCCTTCCAAGCCAGTTCCTCCCACACAGGCTGTGAGGGAGGCCAAAAATGAAACCTCTTTTGGTGGCCGTGGTGGTGGCCGAGGAGGTGGACGAGGATATGGACGTGGACGTGGTGGTGGCAGTGGTTTTGGTCGTGATTTTTCCAATGACGAGAACTCATCTGCCCCTGCTAACCAAGGATCTTTTGAAGGGGAGGCTGGGAATCCCTCAGAAAGACGTGGTTATGGTGCACCACGTGGGGCTTATCGTGGCGGTGGTGGTGGTCGTGGTGGACGTGGACGTTTTAGCAATGGTGAAGTTGGTGATGATGGACGCCCAAGAAGAGCCTTTGAACGCCACAGTGGGACTGGACGAGGAAATGAATTCAAGCGTGATGGTGCTGGACGAGGAAACTGGGGCAACCAATCTGATGAAATTGCTCAGGTGACTGAGGAAGTGGCGGATGAAACTGAAAAGAATTTTGGTGATGAGAAGCCTGTAGGTGAGGAAGATGCAGCAGATGGAAACAAGGACAGTCCTGCCAATGAAAATGAAGAGAAGGAACCAGAGGACAAGGAGATGACCCTGGAAGAGTATGAGAAAGTGCTGGAAGAGAGAAGGAAGGCCCTGCAGGCGCTCAAGACTGAAACAAGAAAGGTGGATATCAAGGAGTTTGCATCCATGCAGCCACTGTCAAACAAGAAAGACAATGATGAGATATTTATTAAATTGGGATCCGAAAAGGATAAGCGTAAAGATGCTTTGGAGAAGGAGGAGAGATCCAAGAAGTCTGTGAACATCAATGAGTTTCTGAAACCAGCTGAAGGGGAAAGGTTCTACAACACAAGTGGTCGTGGAAGAGGACGTGGTCGTGGTGGTGGTGGTAGAGGAGGAGGATACAGTGGAAATGCAGGGAGCAATGTTGCAGCTCCATCAATTGAGGATCCTGGCCAATTCCCAACCTTGGGTGGCAAGTGA 1122 0.5241 MATANPFDLLGDDAEDPSQLIAAEQLKAAAAPKKEQGKPGPRGGAVAQQSKPAQLPSKPVPPTQAVREAKNETSFGGRGGGRGGGRGYGRGRGGGSGFGRDFSNDENSSAPANQGSFEGEAGNPSERRGYGAPRGAYRGGGGGRGGRGRFSNGEVGDDGRPRRAFERHSGTGRGNEFKRDGAGRGNWGNQSDEIAQVTEEVADETEKNFGDEKPVGEEDAADGNKDSPANENEEKEPEDKEMTLEEYEKVLEERRKALQALKTETRKVDIKEFASMQPLSNKKDNDEIFIKLGSEKDKRKDALEKEERSKKSVNINEFLKPAEGERFYNTSGRGRGRGRGGGGRGGGYSGNAGSNVAAPSIEDPGQFPTLGGK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g00150 373 MobiDBLite consensus disorder prediction 26 245 - -
Viun10g00150 373 MobiDBLite consensus disorder prediction 266 285 - -
Viun10g00150 373 Pfam Hyaluronan / mRNA binding family 161 268 IPR006861 -
Viun10g00150 373 MobiDBLite consensus disorder prediction 151 180 - -
Viun10g00150 373 MobiDBLite consensus disorder prediction 101 120 - -
Viun10g00150 373 Pfam Stm1 1 80 IPR019084 -
Viun10g00150 373 MobiDBLite consensus disorder prediction 200 245 - -
Viun10g00150 373 Coils Coil 244 267 - -
Viun10g00150 373 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 372 IPR039764 GO:0003723
Viun10g00150 373 MobiDBLite consensus disorder prediction 294 373 - -
Viun10g00150 373 MobiDBLite consensus disorder prediction 294 314 - -
Viun10g00150 373 SMART HABP4_PAI_RBP1_2 161 269 IPR006861 -
Viun10g00150 373 Gene3D - 159 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g00150 Viun-Chr10 950484 954399 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g00150 K13199 - gmx:100791259 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00150 10 950484 954399 Viun10g00150 10 950484 954399 ECH
Viun10g00150 10 950484 954399 Viun5g00668 5 4141541 4146448 PCT