Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00666 ATGAGAACTCTTCACCACGCTCCAACCCTCCTTAGACCACACTGCACAACCCAACTTCAATCAACCCAAACCGTACAAAAGATGGACAAAATGATGAACGCCAACATGCCTCAGTTACGATCATCGTCGTCCGTGTCACCACCATTGACGTCATTGACCAACAAGGTTGGAAAGAGATGGAAGGAATACCAAGGAGTGAACAATTGGAACGGTTTGTTAGACCCCTTGGACGAGAACCTTCGCGCCGAGATTCTCCGCTATGGCCACTTCGTTGAGGCCGCGTATAAGTCCTTCCAATTCGACCCTTCTTCCCCTAACTACGCCACATGCAAGTTCACAAAGACCACACACCTGGAAAGGTGCGGGTTACACAAAACAGGTTACAAGGTAACCAAACACCTACGTGCAACCTCGGGGATCAAACTACCTAGCTGGGTGGACAAAGCACCGAGTTGGGTGGCAACACAGTCAAGCTACATTGGGTACGTAGCAGTTTGTCACAACAAAGAAGAGATCAAACGACTGGGTCGAAGAGACATTGTTGTCGCATTCAGAGGTACCACCACGTGTCTTGAGTGGCTCGAAAATCTTCGAGCTACTCTGACAAACGTGGTTCCATCTACCGCAACTGGGATCACGGCAGCAGAGCCATGCAGCGTGGAAGAAAATGGAACCATGGTGGAAAGTGGGTTCCTGAGTTTGTACACGTCAAAGGTGAGTGACAAGCCTTCGTTTATGAGCTTGCAAGATATGGTGAGAAAAGAGATTGCTCGGATCCTTAGAACTTACGAAGGAGAAAACTTGAGTTTGACCATTACTGGGCATAGTTTGGGGGCGGCATTGGCGACTCTAACCGCGTATGACATAAGAAACAGTTTTCTGCGGCCACCGCATGTGACGGTGATATCTTTCGGCGGACCGCGCATCGGCAACCGGAGCTTTCGGCGGCGGCTGGAGGAGCAGGGAACTAAGGTTTTGCGGATAGTGAACTCGGATGATGTTATAACGAAGATACCCGGATTTGTGTTTGAGGAGGTGGAAGAAAAGGAAGGTGACGACGTGGAGGTGAATGGAGGTGAACACATGGGTAGTTTTCAGAGATGGATGCGGAAGCGCGTGGAAGAGGTAAAGTGGCTGTTGTACTCGGAGATCGGGGAGGAGCTTCGTCTTTGTAGCAGGGATTCTCCGTACCTCAAGGGAATTAATATTGCCACGTGTCACGATTTGAATATCTATCTGCATCTTGTTGACGGCTTTGTCAGTTCCACATGTCCCTTTAGGTCCACTGCCAAGAGGTTTCTCCGCCATTAA 1311 0.4958 MRTLHHAPTLLRPHCTTQLQSTQTVQKMDKMMNANMPQLRSSSSVSPPLTSLTNKVGKRWKEYQGVNNWNGLLDPLDENLRAEILRYGHFVEAAYKSFQFDPSSPNYATCKFTKTTHLERCGLHKTGYKVTKHLRATSGIKLPSWVDKAPSWVATQSSYIGYVAVCHNKEEIKRLGRRDIVVAFRGTTTCLEWLENLRATLTNVVPSTATGITAAEPCSVEENGTMVESGFLSLYTSKVSDKPSFMSLQDMVRKEIARILRTYEGENLSLTITGHSLGAALATLTAYDIRNSFLRPPHVTVISFGGPRIGNRSFRRRLEEQGTKVLRIVNSDDVITKIPGFVFEEVEEKEGDDVEVNGGEHMGSFQRWMRKRVEEVKWLLYSEIGEELRLCSRDSPYLKGINIATCHDLNIYLHLVDGFVSSTCPFRSTAKRFLRH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00666 436 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 21 431 - -
Viun5g00666 436 Pfam Lipase (class 3) 181 341 IPR002921 GO:0006629
Viun5g00666 436 CDD Lipase_3 155 340 - -
Viun5g00666 436 SUPERFAMILY alpha/beta-Hydrolases 80 342 IPR029058 -
Viun5g00666 436 Gene3D alpha/beta hydrolase 59 435 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00666 Viun-Chr5 4088423 4089805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00666 46 434 Acyl Lipid Metabolism Gene Families AT2G44810 64.524 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00666 K16818 - gmx:100816744 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00666 5 4088423 4089805 Viun5g00666 5 4088423 4089805 ECH
Viun10g00143 10 898717 899946 Viun5g00666 5 4088423 4089805 PCT