Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00614 ATGGCTAAGGGTCCCGGTCTCTACTCTGATATCGGCAAGAAGGCCAGGGATCTGCTGTTCAAGGACTACCAAAGTGACCAGAAGTTCACCGTGACCACCTTCTCGCCCACCGGAGTTGCTATTACGTCATCAGGAACCAGGAAAGGTGAACTTTTTGTTGCTGATGTCAACACACAGTTGAAGAACAAAAACATCACTACTGATATCAAAGTTGATACTGATTCTAATCTATTCACAACTATCACTGTCAATGAACCTGCTCCTGGTCTTAAGGCTATCTTTAACTTCAAAGTTCCTGACCAGAGGTCTGGAAAGGTGGAACTTCAGTACTTGCATGACTATGCTGGAATAAGCACCAGTGTTGGGTTGACAGCAAACCCAATTGTTAACTTCTCTGGTGTTGTAGGAACCAACGTTCTTGCTCTTGGTGCTGATCTTTCTTTTGACACCAAAATTGGGGAGTTAACAAAATCCAATGCTGGACTGAGCTTCACTAAGGATGACTTGATTGCCTCATTGACTCTGAATGACAAAGGTGATGCTCTGAATGCTGCATATTATCATGTAGTTAACTCCGTGACCAACACTGCTGTTGGTGCTGAGGTCACTCATCGTTTCTCAACTAATGAGAACACTCTCACCCTTGGTACCCAACATGCATTGGATCCATTGACCACATTGAAGGCACGTGTCAACAACTTTGGCAAAACAAGTGCTCTCATCCAGCACGAGTGGCGTCCCAAATCATTCTTTACGATTTCTGGTGAGGTAGACACCAAGGCCATTGAAAAGAGTGCCAAGGTTGGATTGAGTTTGGTTCTCAAGCCCTAA 831 0.4465 MAKGPGLYSDIGKKARDLLFKDYQSDQKFTVTTFSPTGVAITSSGTRKGELFVADVNTQLKNKNITTDIKVDTDSNLFTTITVNEPAPGLKAIFNFKVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSGVVGTNVLALGADLSFDTKIGELTKSNAGLSFTKDDLIASLTLNDKGDALNAAYYHVVNSVTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKTSALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLSLVLKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00614 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Viun5g00614 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Viun5g00614 276 Gene3D Porin 1 275 IPR023614 -
Viun5g00614 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Viun5g00614 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
Viun5g00614 276 FunFam Outer mitochondrial membrane protein porin 1 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00614 Viun-Chr5 3727789 3731606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00614 K15040 - gmx:100170728 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00614 5 3727789 3731606 Viun5g00614 5 3727789 3731606 ECH
Viun5g00614 5 3727789 3731606 Viun3g04542 3 53110129 53112060 ECH