Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04542 ATGAGCACCAGTCCAGGGATATATTTTGATATTGGCAAGAAGGCTAAAGATGTTCTGCACAAGGACTATTCAAATCTATCACCAATTCACTTTCATTACCAATTCATGGACTACAACGTAGACCTCTCTTGTCAATTAAATGAACTTCTACCTGGATTCAGGAGCCTTTTCAAATGCACCATACCTGATTCAGGGAAGGTAGAAGTACAACACTTGACTAACTACACTGGAATCACTGGATGCATTGGACTGGAAGGAAACTTAGAAAAAGGATATGATCCTGTTCTGAACTTGTCGGGTCTTGTGGGAACAAACATCTTGTCACTTGGAGCCAATGTTGCTTTAGACATACCATCAAGAACATTCAGTAATCTGAATGCTGGATTAAACCTCAACACTCCCTTCCTTGTTGCTTCCTTGACCATGCATAACAGTTTCGACATTCTGAAAGCTTCCTGTTATCATGAAGTGAACCCCCTAAGCAAAACTGCCATTGCAGCAGAGCTGAAGCATAGCTTGTCAATGGGGGAGACTAGTGCCACCATTGGTGCTCAGCATGCAGTTCTTCCCGAAACGTTAGTAAAGGCTCGATTTGACACCTATGGCAAGGCAGGTGCTGTTGTTCAACAAGGGTTCTGGGAGAGATTTTATGTGGCTATGGCTGGAGAAGTGGATTTTAAGACCACAGATAATAATCTGCATCCCAAGGTTGGAGTCTCTGTGGCTTTGAAACCCTAG 738 0.4309 MSTSPGIYFDIGKKAKDVLHKDYSNLSPIHFHYQFMDYNVDLSCQLNELLPGFRSLFKCTIPDSGKVEVQHLTNYTGITGCIGLEGNLEKGYDPVLNLSGLVGTNILSLGANVALDIPSRTFSNLNAGLNLNTPFLVASLTMHNSFDILKASCYHEVNPLSKTAIAAELKHSLSMGETSATIGAQHAVLPETLVKARFDTYGKAGAVVQQGFWERFYVAMAGEVDFKTTDNNLHPKVGVSVALKP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04542 245 FunFam Mitochondrial outer membrane protein porin 1 isoform A 2 244 - -
Viun3g04542 245 Gene3D Porin 3 244 IPR023614 -
Viun3g04542 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 40 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
Viun3g04542 245 Pfam Eukaryotic porin 36 234 IPR027246 GO:0005741|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04542 Viun-Chr3 53110129 53112060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04542 K15040 - gmx:100787061 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00614 5 3727789 3731606 Viun3g04542 3 53110129 53112060 ECH
Viun3g04542 3 53110129 53112060 Viun3g04542 3 53110129 53112060 ECH