Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00384 ATGATCACTCTACTAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATTCTAGCCTATGGCTCAGTCAAGTGGTGGAAGATTTTCTCCCCTGACCAATGTTCTGGCATCAACCGTTTTGTGGCACTCTTTGCAGTGCCTCTTCTCTCCTTCCACTTCATAGCATCCAACAACCCTTACAAGATGAACCTTAGGTTCCTAGCTGCTGACACCCTTCAGAAGATCATAATACTAGTCCTTCTTGCAGTCTGGAGCAACTTCACCAAAAGGGGTTGCTTGGAATGGACCATAACCTTGTTCTCCCTCTCCACCCTCCCAAACACCTTGGTCATGGGGATCCCTCTGCTCAAAGGTATGTATGGTGAGTTCTCGGGGAGCCTCATGGTGCAGATTGTGGTCCTTCAGTGCATCATTTGGTACACCTTGATGCTCTTCATGTTTGAGTTCAGGGGTGCCAGAATGCTCATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTCGACTCTGATGTCATGTCGTTGGATGGAAGGCAACCTCTTGAGACTGAAGCTGAGATCAAAGAAGATGGCAAACTCCATGTCACTGTGAGGAAATCCAATGCCTCAAGATCAGACATCTTCTCTAGAAGGTCTCAGGGTCTCTCTTCCACCACTCCACGCCCTTCTAACCTCACAAATGCAGAGATATACTCCTTGCAGTCTTCTAGGAACCCTACGCCAAGAGGCTCTAGCTTCAACCACACTGATTTCTACTCAATGATGGCTGCCGGTGGCAGAAACTCCAACTTTGGTGCCTCTGATGTTTATGGCCTTTCAGCTTCAAGAGGGCCAACTCCAAGGCCTTCTAACTACGATGAAGATGGTGGCAAGCCAAAGTTTCATTACCATGCCGGTGGAACCGGACACTACCCTGCACCGAACCCTGGCATGTTCTCTCCCTCTAATGCCTCCAAAAGTGTTGCTGCTGCTGCCGCTAATGCTAATGCTAATGCTAATGCCAAGAAGCCTAATGGGCAGGCTCAGCTGAAGCCTGAGGATGGGAATAGGGACCTTCACATGTTTGTTTGGAGTTCAAGCGCTTCACCAGTCTCTGATGTGTTTGGTGGCCATGAGTATAGTGGTCATGATCAGAAAGAAGTCAAATTGAATGTATCTCCAGGAAAAGTGGAGAACCATAGAGACACTCAGGAGGACTACCTGGAGAAAGATGAGTTCAGCTTTGGGAATAGAGGAATGGAGAGGGAGATGAATCAGCATGAGGGTGAGAAAGTTGGAGATGGGAAGCCAAAAACCATGCCTCCTGCAAGTGTGATGACAAGACTTATATTGATTATGGTGTGGAGAAAACTCATCAGAAACCCCAACACCTACTCTAGTCTAATTGGCCTCACTTGGTCTCTTGTTTCATTCAGGTGGAATGTAGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCTTACACGTTGCCATTGTTCAGGCAGCACTTCCCCAAGGAATTGTCCCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTCAGCACAGCTGTTATTTTTGGGATGTTGATTGCGTTGCCCATAACTCTGGTGTACTACATTTTGATGGGGTTGTGA 1830 0.4738 MITLLDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIIILVLLAVWSNFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGGKPKFHYHAGGTGHYPAPNPGMFSPSNASKSVAAAAANANANANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGGHEYSGHDQKEVKLNVSPGKVENHRDTQEDYLEKDEFSFGNRGMEREMNQHEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00384 609 Pfam Membrane transport protein 9 604 IPR004776 GO:0016020|GO:0055085
Viun4g00384 609 MobiDBLite consensus disorder prediction 213 235 - -
Viun4g00384 609 NCBIfam auxin efflux carrier 1 609 IPR014024 -
Viun4g00384 609 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00384 Viun-Chr4 2526958 2530771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00384 1 600 Organic Solute Cotransporters AT1G73590 73.892 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00384 K13947 - gmx:100499637 1147.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00053 3 239788 242959 Viun4g00384 4 2526958 2530771 PCT