Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00304 ATGACAATGAAGAATAAAGAGCAACAAGGCAAAGGTGAAGGTTCATTTCTGAAACTCTTTCTTGCTCAACTAGACCTTCTCAACTTCTTTGCTCATGCTCTAGTTTTTGGTACTGGTTTACTCATTGGAATCACTCTCACTTTCTTTCTCAACAATTTCTCCTTTGTCAACTTTCAAATTCAACAATCCAATACCCTCAAACTGCCACCGTCACCACCACCATCACCACCACCACCGCCTCCGCCACCGCCACCGCCACCTCCGATCTCCTCCAACATCTCATCACCAATATCAGCAGCCACCCAGAAAGATAACCAAACCGTACCTTCTTCAAAAAACAACACCTCATCTTCACCCCAGAATAAGGATAACAAAACCGTACCTTCTTCTGATTCGTCCTCGGTGAACAACGCAACAAAGGTGATGAATTTCACCAGAATTGGGTTGAGTGAGTTCTTGAAGCCCCCCATGGCCATGCATGATATGAATGATGAAGAATTGTTGTGGAAAGCTTCCATGGTTCCCATGATTCAGAATCTCCCGTTCAAACAGACTCCAAAGGTTGCATTCATGTTTCTGACAAAAGGGCCTGTGATGTTGGCTCCTCTGTGGGAGAGATTCTTCAAAGGAAATGAAGGATTGTATTCTATCTATGTCCATTCCCACCCTTCCTTCAATGAAACAGTGCCTCCAAGCTCTGTCTTTCATGGCCGCAATATCCCTAGTAAGGAAGTAAGGTGGGGTGAGAACAGCATGATTGAAGCAGAGAGAAGGCTATTAGGCAATGCACTCCTTGATTTCTCGAACCAACGTTTTGTGCTACTCTCAGAGTCATGCATTCCTCTGTTTAACTTCAACACCATCTACACTTACCTGATGAACTCAACCAAGATCTTTGTGGAGGCCTATGATCAGCCCGGTGAAGTGGGCCGTGGCAGGTACAGGTCCAAAATGAGGCCCGAGATCAGTCTCTCCCAATGGAGAAAAGGGTCTCAATGGTTCCAAATAGACCGTTTTCTGGCCCTTCAAATAGTCTCAGACCATCACTACTTCCCAGTCTTCTTAAAGTACTGCAACCCTAATTGCTACAGCGATGAACACTACTTGCCCACATTTGTTAGCATCAAGTTCTGGAAGAGCAACTCCAACAGGACCTTGACATGGGTTGATTGGACAAAGGGTGGTGCTCATCCTACAAGGTATTACAGAAATGATGTCAACAATGAGTTTTTGAACAAGCTCAGGTTTGGAACATCATGCGAGTACAATGGTCACACCACAAATATTTGTCATTTGTTTGCAAGGAAATTCACCACTCATGCTTTGGATAGATTGCTCAGATTTGCTCCGAAGCTCATGCAGTTCAATTGA 1371 0.4449 MTMKNKEQQGKGEGSFLKLFLAQLDLLNFFAHALVFGTGLLIGITLTFFLNNFSFVNFQIQQSNTLKLPPSPPPSPPPPPPPPPPPPPISSNISSPISAATQKDNQTVPSSKNNTSSSPQNKDNKTVPSSDSSSVNNATKVMNFTRIGLSEFLKPPMAMHDMNDEELLWKASMVPMIQNLPFKQTPKVAFMFLTKGPVMLAPLWERFFKGNEGLYSIYVHSHPSFNETVPPSSVFHGRNIPSKEVRWGENSMIEAERRLLGNALLDFSNQRFVLLSESCIPLFNFNTIYTYLMNSTKIFVEAYDQPGEVGRGRYRSKMRPEISLSQWRKGSQWFQIDRFLALQIVSDHHYFPVFLKYCNPNCYSDEHYLPTFVSIKFWKSNSNRTLTWVDWTKGGAHPTRYYRNDVNNEFLNKLRFGTSCEYNGHTTNICHLFARKFTTHALDRLLRFAPKLMQFN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00304 456 Pfam Core-2/I-Branching enzyme 188 414 IPR003406 GO:0016020|GO:0016757
Viun4g00304 456 MobiDBLite consensus disorder prediction 66 137 - -
Viun4g00304 456 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 141 446 IPR044174 GO:0016757
Viun4g00304 456 MobiDBLite consensus disorder prediction 67 92 - -
Viun4g00304 456 MobiDBLite consensus disorder prediction 93 137 - -
Viun4g00304 456 SUPERFAMILY Formin homology 2 domain (FH2 domain) 78 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00304 Viun-Chr4 1834020 1838631 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00304 - - gmx:100803748 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00304 4 1834020 1838631 Viun4g00304 4 1834020 1838631 ECH
Viun3g00196 3 1087217 1090042 Viun4g00304 4 1834020 1838631 PCT