Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00196 ATGAAGAAGACTAAGCAACAAGAACGTTCTCTCGGTGCTGCAAATTTCTCGAATGCTCAATCACAGTTTTTCAACTTCTTCTCTCATGTTCTTGCATTTTCCTCTGGTTTGCTCATCGGAATCACCATCATCACTTTCTCTCTCAAAAACTTTTCCCTCAATTTTCAATTCCACCAACTCTCTCTTCAATCTTTGCCTGCTCCTCCTTTTTCTGCTTCAATCTCAACTTCACACAATCATTCAAAAGTCACCACCATCTTCACTCCAAATGGCTCAACCAAAGCTATGCATAACATGACAGAAGAGGAGTTGCTGTGGAGAGCTTCCATGGTTCCTAGGATTAAGGAACTTCCCTACAAACATGCCCCCAAGGTTGCATTTATGTTTCTGACAAAAGGACCAGTCTTTTTGGGTCCTCTCTGGGAGAGATTCTTCAAAGGAAATGAAGGCTTTTATTCTATCTATGTCCATTCGCATCCTTCTTTCAACGAAACACTGCCTCAAAATTCTGTCTTTCATGGCCGCAGAATCCCAAGCAAGGAGGTAAGATGGGGCGAGTTCAACATTGTAGGGGCAGAGAGGCGTCTACTAGCCAATGCTCTGCTCGACTTCTCCAACCAACGTTTTGTTCTTCTCTCAGAATCATGCATTCCTCTCTTCAACTTCTCAACCGTCTATAACTACCTCATCAACTCAACCACCACCTTCGTGGAGTCCTACGATCTTCCAGGTCCAGTGGGGAGAGGCAGGTACAGTCCCAGAATGAAACCACTGCTTACGCTTTCTCAGTGGAGAAAAGGCTCCCAATGGTTCCAAATAGACCGTGCCCTTGCCACCGAGATTGTCTCCGACCAACTATACTTCCCCCTGTTCAACAAACATTGCAGAAATGGATGCTACGGTGATGAACACTACTTGCCGACTTTTGTCACCATCAAGTTTTCGCAGAGTAACTCCGACAGAACTTTGACGTGGGTCGATTGGTCTCAGGGTGGACCCCATCCAGCAAGGTTTATGAGAAGAAACGTTACCATAGAATTTCTCAAGTGGCTGAGGCATGGAACAACGTGTGAGTACAATGGGAAGAGCACCGATGTTTGTTACCTCTTTGCAAGAAAGTTCATGCCTCAGGCTTTAGATAGATTGCTCAGGTTCGCTCCAAAGATAATGCACTTCAATTGA 1182 0.4501 MKKTKQQERSLGAANFSNAQSQFFNFFSHVLAFSSGLLIGITIITFSLKNFSLNFQFHQLSLQSLPAPPFSASISTSHNHSKVTTIFTPNGSTKAMHNMTEEELLWRASMVPRIKELPYKHAPKVAFMFLTKGPVFLGPLWERFFKGNEGFYSIYVHSHPSFNETLPQNSVFHGRRIPSKEVRWGEFNIVGAERRLLANALLDFSNQRFVLLSESCIPLFNFSTVYNYLINSTTTFVESYDLPGPVGRGRYSPRMKPLLTLSQWRKGSQWFQIDRALATEIVSDQLYFPLFNKHCRNGCYGDEHYLPTFVTIKFSQSNSDRTLTWVDWSQGGPHPARFMRRNVTIEFLKWLRHGTTCEYNGKSTDVCYLFARKFMPQALDRLLRFAPKIMHFN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00196 393 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 62 383 IPR044174 GO:0016757
Viun3g00196 393 Pfam Core-2/I-Branching enzyme 125 352 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00196 Viun-Chr3 1087217 1090042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00196 - - gmx:100815747 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00196 3 1087217 1090042 Viun3g00196 3 1087217 1090042 ECH
Viun3g00196 3 1087217 1090042 Viun4g00304 4 1834020 1838631 PCT