Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00288 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGTCTCTTCCTCCTTCCACCTTCTCTTCCTCCTCCTCTTCTCTTCTTCCCTTTTGCTCATCAACTTCTTGAACTTCGTTGCCACCTTCACCATCTTCCAAAGAGATCACCACTATGAATATGTCTCTTCTGAGTACGATGAAGAAGAAGAAGAAGAAGAAGAAATTCAAGAAAGATACTCTTATGAGCATGATTCTGGTGAGTCAGATCACCTTGTAGCTGACATCATTGGTGGTGGAGAAACCCTTTTGTTTGTGCACAACAACCGGTCTCTCAGGAGCACTCATTCTTCTTCTGATGAATTCACAAGCCCTTGTGATAGCCTTGAAGAAGAGTTATTAGAAGAAAACTATTCAACAGAAACCCTGTCTTTTCACAAGTCACCTTTGCTCTCAGACTTGGAGAATGAAGAAGAGGTAGAAGAATTAATATTTCCAGCTGAAGATGCTGATTCTGTTCCAAATTCTGTCCCTGATGAAACCAGGCCCACCCTGAACCTCTACAAAAGTGACTCACCAGACAGTGACAAAAACTGTGATGATCTTGCTGAAATTGGACTTGTTGAAAACAAGAAGCTGCAAGAGGAAAGACTCACACGAGATGAGAGATTCTTGGTCTATGATCCTACCCAATTGGAGGCCAAGAAGCTCATTGTTCAGGAAAAGGATGATGAAGAAATATATGGTGACTCGTGCACTGTTGGATCCACTTCCAAGAGTTCCTCTGAGTGGAGAAGCTCCATTAACTGCAGAGATTCTGGAACTGATGACCCTTTTTCTTCCTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACAGTTTTCCAAAAGTATGATGAAGAAATGTCATTCCAAGATAGAATTAGTGCACAGAAACTTCAAGAAATTGAATCTTTAAGGTCTATCAAGGTATCTCCGAGGTCAATTTCAGAGCGCATTGTGTTCAAGTTTTCAAGTATGAACAAGAAACCAAACGATACACGTCACAACCCATATCATGAACTTGAGGCTGCATATGTTGCACAAATTTGCTCAACATGGGAAGCTCTCAATTGGAACTACAAGAATTTTCAATCCAAACGAGCTTCACGAGGCCATGATGTTGATGTGGGTTGTCCAGCCACCGTTGCACAGAGATTACAACAATTTCAAGTGTTGTTGCAGAGATACATAGAGAACGAGCCCTATGAGCATGGTAGAAGACCAGAGATCTATGCTAGAGTGAGACATTTGGCTCCAAAATTGCTCCTAGTACCAGAATATCGAGAATCAGAAGATGATGAGAGAGAAGAAAATGGTGTTCAGTCAAAAATATCATCAGCTTCATTTCTTATGATAATGGAAGATGGGATCAGAACGTTCATGGGTTTTCTGAAGGCTGATAAAGAGAAACCATGTCAGATATTCGCAGCTTACTTTCGGAGAAACCGAAGACCCTTGGTTGATCCAACACTTCTACGCCTCATCAAGAAAGTTAATCAAAAGAAGAAGATGAAAGTGAAGGACCTTAGACGTTCAAGAAAATGTTTGAGGAAGAGAAAGTTGAAGGGAGAAGAAGAGATGGAGATTTTGATGGCACTGATAGACCTGAAAGTGGTGTCAAGGGTTTTGAGAATGAGTGAGTTAAGTGAGGAGCAGTTGCATTGGTGTGAAGAGAAGATGAGCAAAGTAAGAGTGGTGGAAGGAAAACTAGAAAGAGATTCCTCGCCACTTTTTTTCCCTGCACATTGA 1776 0.4133 MPCSKEEALVRLFYNVSSSFHLLFLLLFSSSLLLINFLNFVATFTIFQRDHHYEYVSSEYDEEEEEEEEIQERYSYEHDSGESDHLVADIIGGGETLLFVHNNRSLRSTHSSSDEFTSPCDSLEEELLEENYSTETLSFHKSPLLSDLENEEEVEELIFPAEDADSVPNSVPDETRPTLNLYKSDSPDSDKNCDDLAEIGLVENKKLQEERLTRDERFLVYDPTQLEAKKLIVQEKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFQDRISAQKLQEIESLRSIKVSPRSISERIVFKFSSMNKKPNDTRHNPYHELEAAYVAQICSTWEALNWNYKNFQSKRASRGHDVDVGCPATVAQRLQQFQVLLQRYIENEPYEHGRRPEIYARVRHLAPKLLLVPEYRESEDDEREENGVQSKISSASFLMIMEDGIRTFMGFLKADKEKPCQIFAAYFRRNRRPLVDPTLLRLIKKVNQKKKMKVKDLRRSRKCLRKRKLKGEEEMEILMALIDLKVVSRVLRMSELSEEQLHWCEEKMSKVRVVEGKLERDSSPLFFPAH 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00288 591 PANTHER DNA LIGASE (DUF1666)-RELATED 12 591 - -
Viun4g00288 591 Pfam Protein of unknown function (DUF1666) 349 589 IPR012870 -
Viun4g00288 591 Coils Coil 53 73 - -
Viun4g00288 591 MobiDBLite consensus disorder prediction 164 190 - -
Viun4g00288 591 MobiDBLite consensus disorder prediction 246 280 - -
Viun4g00288 591 Coils Coil 508 528 - -
Viun4g00288 591 MobiDBLite consensus disorder prediction 171 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00288 Viun-Chr4 1698338 1701028 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00288 - - gmx:100786564 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00288 4 1698338 1701028 Viun4g00288 4 1698338 1701028 ECH
Viun3g00216 3 1232337 1235252 Viun4g00288 4 1698338 1701028 PCT