Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00216 ATGCTGCTATGTCCCAAACAAGATGCACTTCTTAAACTATTCTACAATGTCTCAAACCCTCTTCACCTTCTCTTTCTCCTTCTCTTCTCCTCTGCCATTTTCCTTCTCACCTTCTTAACCTTCACAGGCAGATACCCCTTCATCCAAAGGGATCAAGAATATGAATATGTGTACACCGAGGATGAAGAAGAAGAAGAAGATACTCAAGAAGGGTATTCTTGTGTTGATTCCACCGAGGGAGAGAACATCAGTTGTGGGAAAGAAGTTCCTGTGTTTGTGCACAATGAGAGGCATCAAAGGACTCACTCTTATTCTGAAGAGTTCATAAGCCCCAGAGAGAGCTTGAATGAAGAGTCAGAAGAAAAGCATTATTCTGAAACGTTGTCTCTCCATAAGTCTCCACAAGTCTCTGACTTCGACAATGAAGAGGCAGAAACGGTTGAAGAAGACTTTACAGCAAGAGATTCTGATTCTGTTCCAAATTCTACCCAAAACGCTTACAAAGGAAAAAAAAACCATGACGATGATCACGTTAGCGTTGAAATTATTAGAAACAAGAAGGTGCAAGAGCCAAACCTTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAGCTGCAGAGTAAGAAGTTGATGGTTGAAGAGAAGGATGACGAGTCCTCTAAATGGAAAAGCTCCATCAATTGCAGGGATTCCGAGACTGAAGATGCATTTTCTTCTTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAAATGGCAATTCTAGACAGAATCAGTGCACAGAAACTTCATGAAACAGAGTCATTAAGGTCCATTCAAATGTCTCCAAGATCAATGTCAGAGCGTATCGTGTACAAGTTTCAGACTATAAATAAGAAACCTGCCGATGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATACGTGGCACAAATTTGTTTGACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACGCCAGGACAATGACACAGGTTGTTCTGCCACAGTTGCTCAACAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAGCACGGTAGAAGACCAGAAATCTATGCTAGAATGAGACTTTTGGCACCCAAATTGCTCTTAGTGCCAGAATATCAAGATTTGGAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTGAAGATAATGGAGGATGGGATCAAAACATTCATGAATTTTCTAAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTTAGGAGAAACCAAAGAGGCACAGTTGATCCAACACTACTCAGACTAATGAAGAAGGTTAACCAAAAGAAGAGGGTGAAGGTTAAGGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTGACAGACCTAAAAGTGGTGTCAAGGGTTTTAAGGATGAGTGAATTGAGTGAAGAACAGTTGCACTGGTGTGAGGAGAAGATGAGCAAAGTGAGAATCATGGAAGGGAAACTTCAGAGAGATTATTCCACACCACTTTTCTTTCCCTCACATTGA 1671 0.4099 MLLCPKQDALLKLFYNVSNPLHLLFLLLFSSAIFLLTFLTFTGRYPFIQRDQEYEYVYTEDEEEEEDTQEGYSCVDSTEGENISCGKEVPVFVHNERHQRTHSYSEEFISPRESLNEESEEKHYSETLSLHKSPQVSDFDNEEAETVEEDFTARDSDSVPNSTQNAYKGKKNHDDDHVSVEIIRNKKVQEPNLARDERFFVFASTQLQSKKLMVEEKDDESSKWKSSINCRDSETEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETESLRSIQMSPRSMSERIVYKFQTINKKPADVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASRQDNDTGCSATVAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQDLEEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLRLMKKVNQKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMSELSEEQLHWCEEKMSKVRIMEGKLQRDYSTPLFFPSH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00216 556 PANTHER DNA LIGASE (DUF1666)-RELATED 13 556 - -
Viun3g00216 556 MobiDBLite consensus disorder prediction 103 174 - -
Viun3g00216 556 Pfam Protein of unknown function (DUF1666) 315 554 IPR012870 -
Viun3g00216 556 MobiDBLite consensus disorder prediction 103 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00216 Viun-Chr3 1232337 1235252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00216 - - gmx:100776190 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00216 3 1232337 1235252 Viun3g00216 3 1232337 1235252 ECH
Viun3g00216 3 1232337 1235252 Viun4g00288 4 1698338 1701028 PCT