Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00268 ATGATGAGTTCGGCGGCGAGGGTGCCCAAGCTGGGCTCCTTCCGTCACAGCTTCGCCGAGAAGAAGGAGAGGCTGCTCTCCATGAAGGGCGGAGGTTACTCCCAAATTGGAATCGCGCTGCCGGAGTCCGACGAGGAGGACAACTCTCCGCGGAGGCGATGCTGCTCGTACCGCGCTGTCTCCGACATGATCATCGGCGCGTGGAAGAGCATGAAGCGCGTGGCAGCGCGAGCGTGGGAGATGGGGATGTCTGATCCCAGGAAGATCATATTCTCCGCAAAAATGGGACTCGCTCTCATTCTCCTCTCGCTTCTGATTTTCCTCAAAAAGCCCTTTGAGGACGTTAGTCGATACTCCGTTTGGGCTATTCTCACTGTCGTTGTGGTCTTCGAATTCAGCATAGGGGCAACTCTTAGCAAAGGGCTTAACAGAGGACTGGGGACTTTGTTAGCTGGAGGTCTAGCTTTGGCAATGGGAATCTTATCACAGTTGGCTGGAAAATGGGAAGAGCTCATCATAACTGTTAGCATCTTCACTGTAGGATTTTGTGCCACATATGCAAAACAATATCCAACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTATCAGGGTATCGAACAGGAGAGTTTGTGCAAACAGCTATAAATAGATTTTTGCTCATTGCACTTGGTGCTGCTGTGGCACTCGGGATAAATGTATGTATATATCCAATATGGGCTGGTGAGGATCTGCATAATCTTGTGGCAAAAAATTTCGTGGGCGTTGCTGCATCATTGGAAGGCGTTGTTAATAACTATCTTAATTGTGTTGAATACGAGAGAGTTCCTTCTAAAATTCTTACATACCAAGCTGCAGAGGATGTGGTTTACAAAGGCTACAGATCAGCTGTTGAATCTACAAGCACAGAGGATTCATTGATGGGTTTTGCTGTATGGGAGCCACCTCATGGTAGATATAAAATGCTTAGATATCCCTGGCAAAATTATGTGAAAGTAAGTGGGGCTCTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCACCACCAGAGAAGAGACAAGTCTTTAGAAGGGAGCTTCAGAAGGTAGGTTCTGAAGGGGCGAAAATTCTAAGGGAACTCGGAAACAAAGTAAAAAAAATGGAGAAACTAGGCGAGGACGACATTCTTTACGAAGTACACGAGGCAGCAGAAGAATTGCAGCAGAAGATTGACAAAAAATCCTTCCTCCTTGTGAATTCAGAGAGCTGGGAAATCGGAAACCGGCCAAGAGGGGAGGGTGATTCTCAAGATCTCTTGCACGTGGATGAAGAAAGACACTTTCTGGAGTACAAGTCTCTAAGTGAAGCCGTGCTTGATCTCAGAGCCGTCAAAGTTCCAAAAGGTTGGGGAGAACAAGCAGCTCCTGAGAAGATACCTGTAGGTGTTGGTGATGAAAACATGTTCAGGAAACAGATATCTTGGCCTGCTCATATTTCCTTCACAGCAGATGCAGTGACAAAAGAGGAAGAATCTAAAACGTATGAAAGTGCTAGTTCTTTGTCTCTAGCCACTTTTACATCGCTTCTGATTGAGTTTGTGGCAAGGCTTCAGAACCTTGTAGATTCTTTCGAAGAGTTGGGCGAGAGAGCAAAATTTAAGGACCCTCTTGAGCAAGCTCCAACAACAACTGGGGGGTTTTGGAACCGGTTGTGTAATGTTTTGACGGGAAAGGATTGA 1773 0.4597 MMSSAARVPKLGSFRHSFAEKKERLLSMKGGGYSQIGIALPESDEEDNSPRRRCCSYRAVSDMIIGAWKSMKRVAARAWEMGMSDPRKIIFSAKMGLALILLSLLIFLKKPFEDVSRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLALAMGILSQLAGKWEELIITVSIFTVGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFVQTAINRFLLIALGAAVALGINVCIYPIWAGEDLHNLVAKNFVGVAASLEGVVNNYLNCVEYERVPSKILTYQAAEDVVYKGYRSAVESTSTEDSLMGFAVWEPPHGRYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFRRELQKVGSEGAKILRELGNKVKKMEKLGEDDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPRGEGDSQDLLHVDEERHFLEYKSLSEAVLDLRAVKVPKGWGEQAAPEKIPVGVGDENMFRKQISWPAHISFTADAVTKEEESKTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGERAKFKDPLEQAPTTTGGFWNRLCNVLTGKD 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00268 590 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 62 570 - -
Viun4g00268 590 Pfam Aluminium activated malate transporter 79 559 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00268 Viun-Chr4 1562953 1569972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00268 10 567 Miscellaneous Gene Families AT3G18440 64.014 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00268 K25841 - gmx:100810157 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00268 4 1562953 1569972 Viun4g00268 4 1562953 1569972 ECH
Viun3g00226 3 1308811 1312121 Viun4g00268 4 1562953 1569972 PCT