Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00226 ATGGCTCCGAGATTGGTGAAATCGGGATCGTTTCGTCACGGTTTGGCGGAGAAGAAGGAGAGGCTTCTGTCGGAGAAGAGTTTTGGTAATATTTCACAGATGGGGATTGGCGTGGCAATGATGCAAGAGGAAGAACAGTCGTGGATGGTGAAGCGGTGGAACACGGCTAAGCAAGTGGCTGAGAAGGCATGGGAGATGGGTCGCTCTGATCCCAGAAAGATTGTTTTCTCTGCAAAAATGGGTCTTGCTCTGACCCTTATTTCGTTTTTGATTTACCTCAAAGAACCCTTCAAGGATTTGATTCGCTACTCCGTCTGGGCTATTCTAACTGTCGTCGTAGTCTTTGAATTCAGCATAGGACTTGCTCTGGCGATGGCAGAGTTATCAAAATTGGCCGAAGACTGGCAGCGGCTTATGATTATTGTAAACATCTTCACTGTGGGATTCTGTGCCACCTATGCAAAAATATACCCTACTTTGAAGCCTTATGAATATGGGTTCCGCGTGTTCTTGATCACGTATTGTTTCATTACTGTTTCTGGATATCGAACAGGGGAGTTTCTAAATACAGCTATAAACAGATTTTTACTTATTGCACTTGGGGCTTCTGTTTCTTTGGGAGTAAATATCTGCATATACCCTATCTGGGCTGGTGAGGATCTGCATAATCTTGTCACCAAAAACTTCATCGGTGTTGCAACATCTTTGGAAGGCGTTGTCAACCACTACCTTCAGTGTGTTGAATATAAAAAGGTGCCATCTAAAATTCTTATTTACCAAGCTTCTGATGACCCAGTTTACAGTGGCTACAGATCGGCCGTTGAATCTAAAAGTAAAGAAGATGCATTGATGGGATTTGCTGTGTGGGAACCACCACATGGTCGTTACAACATGTTCAGATATCCATGGAAGAATTATGTGAAAGTAAGCGGGGCTCTGAGGCATTGCGCATTTACGGTCATGGCTATGCATGGATGCATACTTTCTGAAATTCAGGCCCCAGCTGAGAAGAGACTAGTTTTCCGTAGTGAGGTTCAAAGGGTGGGTTGTGAAGGGGCAAGAGTGTTGCGTGAGCTTGGAAGCAAGGTTAAAAAGATGGAGAAACTAGGTCCTGGAGACTTGCTGTTTGAAGTGCACGTAGCAGCAGAGCAATTGCAACGGAAAATTGATCAAAAATCATACCTTCTTGTGAATTCAGAGAGCTGGGAAATTGGAAACCGCCCAATTGAGGATGAGGAGAGTGATCCTCAACAAGAAGGAAAGTTTCTTGAGCACAAGTCTCGTAGTGAAGCAGTACTTGATCTTAGAATGGTTGAAGTTCCACATTCTTGGGAAGGAAACGTAACTTTAGCCGATAACCCTCCAACTGATGCCTCTCCAAACATGTTCAGGAAAGAATTATCTTGGCCCGATCAGATTTACCAGAAATCAAATCCAGTGGCCAAAGAGGGTCAAGAATCAAAAACCTACGAGAGTGCTACTTCACTGTCTCTAGCAACATTTATCTCGCTTCTGATTGAATTTGTGGCAAGGCTTCAAAACCTGGTAGATTCATTCGAGGAATTAGGTGAAACAGCAAACTTTTTTGACCCACTCGACCAACGACCACCGGTGGTAGCATCACCTGGTTTTTGGAGCAGGTTGCGCAACTGCTTGACATTCGAGAACTGA 1671 0.4423 MAPRLVKSGSFRHGLAEKKERLLSEKSFGNISQMGIGVAMMQEEEQSWMVKRWNTAKQVAEKAWEMGRSDPRKIVFSAKMGLALTLISFLIYLKEPFKDLIRYSVWAILTVVVVFEFSIGLALAMAELSKLAEDWQRLMIIVNIFTVGFCATYAKIYPTLKPYEYGFRVFLITYCFITVSGYRTGEFLNTAINRFLLIALGASVSLGVNICIYPIWAGEDLHNLVTKNFIGVATSLEGVVNHYLQCVEYKKVPSKILIYQASDDPVYSGYRSAVESKSKEDALMGFAVWEPPHGRYNMFRYPWKNYVKVSGALRHCAFTVMAMHGCILSEIQAPAEKRLVFRSEVQRVGCEGARVLRELGSKVKKMEKLGPGDLLFEVHVAAEQLQRKIDQKSYLLVNSESWEIGNRPIEDEESDPQQEGKFLEHKSRSEAVLDLRMVEVPHSWEGNVTLADNPPTDASPNMFRKELSWPDQIYQKSNPVAKEGQESKTYESATSLSLATFISLLIEFVARLQNLVDSFEELGETANFFDPLDQRPPVVASPGFWSRLRNCLTFEN 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00226 556 Pfam Aluminium activated malate transporter 120 523 IPR020966 GO:0015743
Viun3g00226 556 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 46 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00226 Viun-Chr3 1308811 1312121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00226 7 531 Miscellaneous Gene Families AT3G18440 58.997 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00226 K25841 - gmx:100777792 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00226 3 1308811 1312121 Viun4g00268 4 1562953 1569972 PCT