Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00245 ATGGAGAATGGTGTATCCTCTTTCAATCAGTTTGTCTATGATCTTTCTGTGGATTCTGACAATTCAAGCTTTGAATACTCGTCCGAAGACGACGATAGTGAGATATATAGTGATGGACTTGAATACCCTCCAACTCCTGCATCTCAGAGTTCTAGAACCTCAGAAGCTAGTAATACCAAATTCAGCAGGCATCGGAAGGATTGGATCCAATTTATCAAACTTTCAATTTTGTTTCCTTTCAAGTTATTGCTGTGGATTCCACTTAACCTTTTTCGGCTAGTTTATTATGGGGTGTCAAAAGCCATGTCTTTCTCCAGAAACAAGCGTCCTCCTCCTTTACGTGCACATAATAGAGTGCTGAGTCTCAAGGATCATATTATCCACCGTGCTACTGATAGGAGACGTGGACTTGTAGAGGATCTTCATCTAGGCATAGAGTTATCCATAGAAGCTGTGTTCGATGTTGTTCACAAGGCAGCACATCTTCTTCTTTCCCCTTCAGAAGCTTTTGGGGCATTACACAGGTTGTTTTCATCTCATGAAAGTGCTGTTAAAGAAGATCCTGATGGTGAAGAGGACGGTTCCATATATACAGATACATTAGGAGAAAAAGACCCAAAACCCACAGAGAGAACTGTCAAGTATCAGCCTCTGAATACAGATGCTCGGACATGTCAGGATGTCATAACAGACCTTGGGTATCCATATGAAGCCATTAGTGTGATCACTTCTGATGGATATATTCTTCTTTTGGAAAGAATACCCAGGCGAGATTCAAGAAAAGCTGTTTATCTTCAACATGGGGTTTTGGATTCATCAATGGGTTGGGTATCTAATGGAATCGTTGGCTCTCCAGCTTTTGCAGCATACGATCAAGGTTATGATGTATTTCTGGGGAATTTTCGGGGTTTGGTTTCACGGGAACATGTCAACAAGAACATATCATCACGTCAATACTGGCGATATTCCATCAATGAGCACGGGACTGAGGATATTCCTGCTATGATAGAAAAAATCCATGAAGTAAAGACTTTTGAATTGAGGTTTACCAAACCTGATATAGAGGAGGAAACTGATGACGATCAACCTTACAAGCTTTGTGCCATTTGCCATAGTTTGGGAGGAGCTGCTGTGCTGATGTATGTTATTACTCGAAGGATTGAAGGGAAACCCCATAGACTTTCAAGATTGGTTTTGTTATCACCTGCTGGTTTTCATGATGACTCTAACATGGTTTTTTCTGTGGCTGAACTTCTACTAGTTTTACTGGCTCCTGTTTTGTCTCTTCTTGTTCCTGCCTTCTATATACCAACCAGATTTTTTCGCATGCTTTTCAACAAGTTAGCACGGGATCTGCATAACCTACCTGCAGTTGGAGGGTTGGTTCAAACATTAATGAGTTATGTTGTTGGTGGAGACAGCTCAAACTGGATTGGAGTTTTAGGATTACCACACTATAACATGAATGACATGCCAGGAGTATCTTTTCGTGTTGCTCTCCATCTTTCACAGATGAAGCGCACTGGAAAATTCATAATGTTTGATTATGGTAAAGCTTCTGCCAACATGGAAGCGTATGGTTCACCTGTGCCTTTGGACTTGGGTGAACGCTATGGACTCATAGACATTCCTGTTAATCTTGTTGCTGGACAGAAGGACAAAGTGATAAGGCCTTCAATGGTGAAGAGACACTATAAATTGATGAAGGGTGCTGGTGTAGATGTTTCATACAATGAGTTTGAATATGCACACTTAGACTTCACCTTTTCCCACCATGAAGAACTCTTATCATTTGTTATGTCATGCTTGCTGCTTGTGGATTCTAATGCAAAACATCAAGTGAATCAAAGGGGTTTAAGGTCAAGAAGAAAAGGGCAAGTTGCAAGCAGTGGTTAG 1896 0.4103 MENGVSSFNQFVYDLSVDSDNSSFEYSSEDDDSEIYSDGLEYPPTPASQSSRTSEASNTKFSRHRKDWIQFIKLSILFPFKLLLWIPLNLFRLVYYGVSKAMSFSRNKRPPPLRAHNRVLSLKDHIIHRATDRRRGLVEDLHLGIELSIEAVFDVVHKAAHLLLSPSEAFGALHRLFSSHESAVKEDPDGEEDGSIYTDTLGEKDPKPTERTVKYQPLNTDARTCQDVITDLGYPYEAISVITSDGYILLLERIPRRDSRKAVYLQHGVLDSSMGWVSNGIVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWRYSINEHGTEDIPAMIEKIHEVKTFELRFTKPDIEEETDDDQPYKLCAICHSLGGAAVLMYVITRRIEGKPHRLSRLVLLSPAGFHDDSNMVFSVAELLLVLLAPVLSLLVPAFYIPTRFFRMLFNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWIGVLGLPHYNMNDMPGVSFRVALHLSQMKRTGKFIMFDYGKASANMEAYGSPVPLDLGERYGLIDIPVNLVAGQKDKVIRPSMVKRHYKLMKGAGVDVSYNEFEYAHLDFTFSHHEELLSFVMSCLLLVDSNAKHQVNQRGLRSRRKGQVASSG 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00245 631 MobiDBLite consensus disorder prediction 21 58 - -
Viun4g00245 631 Pfam Partial alpha/beta-hydrolase lipase region 226 280 IPR006693 GO:0006629
Viun4g00245 631 MobiDBLite consensus disorder prediction 43 57 - -
Viun4g00245 631 FunFam Gastric triacylglycerol lipase 214 604 - -
Viun4g00245 631 PANTHER LYSOSOMAL ACID LIPASE-RELATED 172 594 - -
Viun4g00245 631 SUPERFAMILY alpha/beta-Hydrolases 223 598 IPR029058 -
Viun4g00245 631 Gene3D alpha/beta hydrolase 214 603 IPR029058 -
Viun4g00245 631 MobiDBLite consensus disorder prediction 183 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00245 Viun-Chr4 1398965 1404722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00245 1 613 Lipid Metabolism Gene Families AT1G73920 65.700 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00245 - - gmx:100785512 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00245 4 1398965 1404722 Viun4g00245 4 1398965 1404722 ECH
Viun3g00239 3 1358649 1362752 Viun4g00245 4 1398965 1404722 PCT