Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00239 ATGGAATCGGTACTCTCTTTCTCTCTGTTTCGCTTTTGCTTCCTCTTTCTTCGCTGCATTGCCATCATTCTCAAATTCTCTATTTCAAACCAACCATTCAGAATGCAACGTTTTGTTGACGACGTCCTCGCTGTTACTAAAGAGTCGGTGAAGACGTTTACTTATGAGTCGTTGAACAATACTGTGAGACTGATCAATGGTGTCTCAGCTCTGGTGTTGGCACTGCTACCTGGGAAAGCTAATATACTTGAAGGTATTCAGGGTTGGGAGCTCCGGCCAACTTTTCGTGGACCACGCTTACCACGTTGGATGGAAAATGGCGCGTCCTCTTTCAATCAGTTTATTCATGAGCTTTCTTTGGATTCTGATGTATCAAGCCAAGAATATTTATCTGGAGAAGAAGAAGAAGAAGAAGGTGGTGGTGATGAATATGAAGAATATCCTAAGACTCCCTTGTCTCCAAGTTCTAGAGTCCCCAGAGATACTTTTACTGATTACGGTAGACACCAGACGGATTGGATATTGATTTCTTTACAGTTCTTGATGGGTCTTCCATTTCGTCTTTTCCAATTAGTTTATTCTGGGGTGTCAAAACCGCGATCCATCGCTGGCTGTCAACACCCTTCACAACCACATCCACCCAATGGACTGCAAAGCCTCAAGGATCATATTATTCATCGTGCCACTGATAGGAGACGTGGGGTCATAGAGGATCTTCATTTGGCCATGGAGATATTTATAGAGGCTGTTTTTGATGTTATTCACAAGTCTATACATGTTCTCTTTTCCCCATCAGAAGCTTTTGGAACTTTATTCAGGTTGTTTTCATCTAATGAAAGGCCCATTTTAGTTGATAAAGATGTTGTTGAGGATGCCTCTGTTTCTTCAGCACCGGCAGAAAGGAATACCAGCTTTCGTTCGTCTCTTAACACAGATGCCCGGACATGTCAAGATGTTATAACAGAGCTAGGGTATCCATATGAAGCTATTCATGTGATCACTGCCGATGGATATGTTCTTCTTCTAGAAAGAATTCCTAGGCGAGATGCACGTAAAGCTGTTTATCTTCAGCATGGAACCTTTGATTCATCAATGGGTTGGGTATCTAACGGTGTTGTTGGCTCTCCCGCCTTTGCAGCCTATGATCAAGGCTTTGATGTATTTCTGGGAAATATTCGTGGTCTGGTTTCTAGGGAACATGTCAACAAGAATATCTCCTCTCGTGAATACTGGAAGTATTCCATCAATGAATATGGGACGAAAGACATTCCTGCTTTAATTGAGAAAATTCATCAAGTAAAAACTACAGAATTGAAGCTTAGTAAGCCTGATATTGAGGAGGAAAGTAATGACGATCAGCTCTACAAGCTTTGTGCAATTTGCCACAGTTTGGGGGGAGCTTCTATGTTAATGTATGTTGTTACGCGTAGGTTAAAATCAAAGCCCCATAGACTTTCAAGATTGGTTTTGTTATCACCTGCTGGTTTTCATCATGACTCAAGCCTACTCTTTTCTGCGGCGGAGCGAGTGTTGTTTTTGCTGGGCCCTATTTTATCTCGTATATTCCCAGCCTTCTATGTACCAACAAGGTTTTTCCGTATGCTTGTTAACAAGTTAGCCAGGGACCTGCAACACCTACCTGCAGCTGGAGGATTGGTTCAAACTTTATTAGGTTATGTTGCTGGCGGGGACAGCTCAAATTGGGTTGGGGTTTTAGGATTACCCCATTACAACATGAATGATATGCCAGGAGTTTCGTTTGGTGTTGCTCTCCATCTTGCACAGATAAAACGTAGTAGAAGATTTAGAATGTTTGATTATGGGAGTGCATATAATATGAAAATATATGGTTCTCCTGAACCTTTGGACCTGGGTGAACATTATGGACTCATCGACATTCCTGTTGATCTGGTTGCTGGTCAGAGAGACACTGTAATACGATCTTCGATGGTAAAGAGACACTATAAGTTGATGAAGGAAGCTGGCGTGGATGTGTCGTATAATGAGTTTGAATATGCTCATTTGGATTTTACCTTCTCTCACCGGGAAGAGCTTCTGTCATATGTTATGTCACGTTTGCTTCTTGTGAAGCCCAGTTCAAAGAATCATCAAAGGGCTCCAAGATTGAGGAGGAAAGGACAGGCTTCAGTAACTGGGTAA 2160 0.4213 MESVLSFSLFRFCFLFLRCIAIILKFSISNQPFRMQRFVDDVLAVTKESVKTFTYESLNNTVRLINGVSALVLALLPGKANILEGIQGWELRPTFRGPRLPRWMENGASSFNQFIHELSLDSDVSSQEYLSGEEEEEEGGGDEYEEYPKTPLSPSSRVPRDTFTDYGRHQTDWILISLQFLMGLPFRLFQLVYSGVSKPRSIAGCQHPSQPHPPNGLQSLKDHIIHRATDRRRGVIEDLHLAMEIFIEAVFDVIHKSIHVLFSPSEAFGTLFRLFSSNERPILVDKDVVEDASVSSAPAERNTSFRSSLNTDARTCQDVITELGYPYEAIHVITADGYVLLLERIPRRDARKAVYLQHGTFDSSMGWVSNGVVGSPAFAAYDQGFDVFLGNIRGLVSREHVNKNISSREYWKYSINEYGTKDIPALIEKIHQVKTTELKLSKPDIEEESNDDQLYKLCAICHSLGGASMLMYVVTRRLKSKPHRLSRLVLLSPAGFHHDSSLLFSAAERVLFLLGPILSRIFPAFYVPTRFFRMLVNKLARDLQHLPAAGGLVQTLLGYVAGGDSSNWVGVLGLPHYNMNDMPGVSFGVALHLAQIKRSRRFRMFDYGSAYNMKIYGSPEPLDLGEHYGLIDIPVDLVAGQRDTVIRSSMVKRHYKLMKEAGVDVSYNEFEYAHLDFTFSHREELLSYVMSRLLLVKPSSKNHQRAPRLRRKGQASVTG 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00239 719 MobiDBLite consensus disorder prediction 126 161 - -
Viun3g00239 719 FunFam Gastric triacylglycerol lipase 305 694 - -
Viun3g00239 719 MobiDBLite consensus disorder prediction 128 143 - -
Viun3g00239 719 Pfam Partial alpha/beta-hydrolase lipase region 317 371 IPR006693 GO:0006629
Viun3g00239 719 SUPERFAMILY alpha/beta-Hydrolases 314 690 IPR029058 -
Viun3g00239 719 PANTHER LYSOSOMAL ACID LIPASE-RELATED 113 694 - -
Viun3g00239 719 Gene3D alpha/beta hydrolase 305 694 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00239 Viun-Chr3 1358649 1362752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00239 35 699 Lipid Metabolism Gene Families AT1G18460 62.974 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00239 - - pvu:PHAVU_002G315000g 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00239 3 1358649 1362752 Viun3g00239 3 1358649 1362752 ECH
Viun3g00239 3 1358649 1362752 Viun4g00245 4 1398965 1404722 PCT