Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g06132 ATGTCCATGAAGAGCAAGGGAGGAGCTGTAGAACTGAGTGCAAGGAACGTTCTGCACAGGAAATGGGCTCTTCTGCTCTGTGTGGCAAGCTTCTGTGCTGGAATGTTCTTCACAAATAGGATATGGTCTATGCCTGAATATGTAGAATTTCCAGGGACTACTAGTGAGATTGAAAGAATAAAATTAAACTCTGATGGTTGTAATCTAAATACAGTTGCAAGGCCAAACTCAAATTACAGTAAAGTGGAAGTTTCAAATACACAGAATGTTGTCAACAATGATGTCAACAATGATGTCAAGAGACCAAGGAAATCAGAGACAGATGAATCAAGTACCAGGAAAAAATATTTCATGGTTATAGGGATCAATACAGCTTTCAGTAGCAGGAAACGAAGAGATTCTGTTCGTACAACTTGGATGCCACGAGCTAATGAAAGGCAAAAGTTGGAGGAAGAAAAGGGCATAATCATACGATTTGTTATAGGTCACAGTTCTACATCTGGTGGCATTCTTGACAAAGCTATTGAAGCTGAGGAGAGGCTTCATGCTGACTTTTTGAGGCTGAACCACGTCGAGGGATACCTAGAACTCTCAGCTAAGACAAAGACCTACTTTTCGACTGCTGTTGCCTTGTGGGATGCGGAATTTTATATTAAAGTTGATGATGATGTTCATGTCAATTTAGCAACACTTGCATTGACTTTGAGCATGCACCGAATGAAACCTCGGGTGTATGTTGGGTGCATGAAATCCGGTCCTGTCCTTGCTCAGAAGGGAGTGAAATACCATGAACCAGAATACTGGAAGTTTGGAGAGGTGGGAAACAAGTACTTCCGTCATGCTACAGGACAATTATATGCCATTTCCCAAGATTTGGCTACTTATATATCAATAAATCAGGATGTGCTTCATAGATATGCCAACGAAGATGTCTCATTGGGATCTTGGTTTATTGGTTTAGACGTGGAGCATGTTGATGATAGGAGAATGTGTTGTGGCACACCCCCTGATTGCGAGTGGAAGGCGCAGGCTGGTAATATATGTGTTGCTTCGTTTGATTGGAAATGCAGTGGAATCTGCAGGTCTGTAGAGAGGATGAAAGAAGTTCACCTGCGTTGTGGAGAGGATGAAAACGCTTTGTGGAGTGCAACCTTGTAA 1158 0.4206 MSMKSKGGAVELSARNVLHRKWALLLCVASFCAGMFFTNRIWSMPEYVEFPGTTSEIERIKLNSDGCNLNTVARPNSNYSKVEVSNTQNVVNNDVNNDVKRPRKSETDESSTRKKYFMVIGINTAFSSRKRRDSVRTTWMPRANERQKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEERLHADFLRLNHVEGYLELSAKTKTYFSTAVALWDAEFYIKVDDDVHVNLATLALTLSMHRMKPRVYVGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLATYISINQDVLHRYANEDVSLGSWFIGLDVEHVDDRRMCCGTPPDCEWKAQAGNICVASFDWKCSGICRSVERMKEVHLRCGEDENALWSATL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g06132 385 Gene3D - 105 331 - -
Viun3g06132 385 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 96 329 IPR002659 GO:0006486|GO:0016020|GO:0016758
Viun3g06132 385 Pfam Galactosyltransferase 130 327 IPR002659 GO:0006486|GO:0016020|GO:0016758
Viun3g06132 385 FunFam Hexosyltransferase 110 331 - -
Viun3g06132 385 Pfam Domain of unknown function (DUF4094) 19 92 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g06132 Viun-Chr3 64778683 64784725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g06132 1 385 Glycosyltransferase AT1G05170 63.923 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g06132 K20855 - gmx:100810168 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g06132 3 64778683 64784725 Viun3g06132 3 64778683 64784725 ECH
Viun5g03087 5 41981732 41985708 Viun3g06132 3 64778683 64784725 ECH
Viun11g01592 11 32285448 32290292 Viun3g06132 3 64778683 64784725 ECH