Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01592 ATGACTTGGAAGAGTAGAGGAGAATTGCCTTCTAGAAGCGTTATTTCGCAGAGATGGGCACTGTTTTTGTGCTTGGGGAGCTTCTGTGCTGGAATGCTCTTTACTACCAGGATATGGACTATTCCTGAAAACAACAAAGGACTAGCCCGACCAACGGCTGCAGAAACTGATAAATTAAATGTTGTTTCAGAAGGTTGCAATTCCAGAATTATGCAAGAATTGGAAATGAAGCGCGATAAAGACATCTATGGTGAAGTTTACAAGAGTCATAATTCCATTCAAACGTTGGACAAGACTATTTCAAACTTAGAGATGGAACTGGCTGCTGCAAGGGCAACTCAGGAGTCTCTACGAAGTGGTGCTCCTGTTTCAGATGATATAAGGATGAGTGAATCATCTGGTAAGAGAAAGTACCTTATGGTCATTGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGACTCGGTTCGCGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGTATCATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGGGGTATTCTTGACAGAGCTATTGAAGCTGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAAACAAAAACCTATTTTGCCACTGCTGTGAATTTGTGGGATGCTGATTTCTACGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTGGGGGAAACTCTGGTTAGACACCGATCGAAACCACGCATATACATTGGATGCATGAAATCTGGGCCAGTCCTATCTCAAAAAGGAGTAAGATACCATGAACCTGAGTACTGGAAATTTGGAGAGGCCGGAAACAAGTATTTCCGACATGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACATACATATCAATTAACCAGGATGTTCTTCACAAGTATGCCAACGAGGATGTCTCACTAGGATCTTGGTTTATTGGACTTGATGCGGAGCATATAGATGATAGAAGACTTTGCTGTGGCACTCCTCCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACATTTGTGTTGCATCGTTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCAGAGAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1221 0.4333 MTWKSRGELPSRSVISQRWALFLCLGSFCAGMLFTTRIWTIPENNKGLARPTAAETDKLNVVSEGCNSRIMQELEMKRDKDIYGEVYKSHNSIQTLDKTISNLEMELAAARATQESLRSGAPVSDDIRMSESSGKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISNDLATYISINQDVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSAERIKEVHRRCGEGENALWSASF 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01592 406 Coils Coil 93 113 - -
Viun11g01592 406 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Viun11g01592 406 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 97 346 IPR002659 GO:0006486|GO:0016020|GO:0016758
Viun11g01592 406 Gene3D - 135 348 - -
Viun11g01592 406 Pfam Galactosyltransferase 152 347 IPR002659 GO:0006486|GO:0016020|GO:0016758
Viun11g01592 406 FunFam Hexosyltransferase 132 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01592 Viun-Chr11 32285448 32290292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01592 1 406 Glycosyltransferase AT1G05170 77.696 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01592 K20855 - gmx:100794838 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01592 11 32285448 32290292 Viun11g01592 11 32285448 32290292 ECH
Viun11g01592 11 32285448 32290292 Viun3g06132 3 64778683 64784725 ECH
Viun5g03087 5 41981732 41985708 Viun11g01592 11 32285448 32290292 PCT