Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g05410 ATGCACACAAGACAGAGGGAGAAGGAGAAGGAGAAGTCCATGAAGGAATCCACCTGCCCACAAAGGAGAAGAACTCCTTCCTTCTCCTCCTCTCTCCTTGACGCCATTTACCATTCCATCGACGAGTCAAAATCCAACCTTCACCAGGATCAACCACCTTCTCTCTTCGATCACAATCCGCAATCTTTCACCTTTGAAAAAAGTGGCAAGAAAGAGAGGATGAATCTCCGCCGCGCCGTCATGCTGGAAGATTGGATGGAGAAGCATACTTCTCATTCCCGTTCCCATTCCCAAACTTCTCACTTTCTCAACTACAGTTCAAGCTCCTCGGAATGCAGCTCTGGGGGGATATTTTCCTCTTCAGAAACCGACACGACAACCTTCAAGAAACACAGACCAAGACCCGCATCGGAGAAGAAGAAACAAGACCACAGGGTTTCCGAGAAGCAGAACAAAGAGGGTGGCTTCGCAAGGACCAAGTTGCGGGCTTTGAAAATTTACGGTGAACTGAATCAGAGAGTGAAGCAACCCATTTCACCGGGGAGTAGAATCGCCAGCTTCCTTAGCTCCATCTTCAACTCGCAGAACGTGAAGAAAGCCAAAATGTGTTACGTTGGGGCTGTTGAAGATGTTAGCTTTGAGCACAAATCAAAGTCCCCGTGTTTCTCTTCCACTCCTTCTTCCTTCTCGAGAAGGTCTTGCATGAGCAAAACACCCTCTTCGGCTAAAAAATCCAACACCAATGGGGTCAAAAGATCCGTGAGGTTCTACCCCGTTAGCGTAATCCTAGGTGAGGATTCTGAGCCACAACCTAGTTATCACAAATGTAGCAACATTTATGAGAGTGAGCCTAATTTCACCGTGAGGAAGATCACTAGAAGTTCTTCGATAAAGGAGCTGAAGAACGGTGTCCGGGGAGAAGAAAATGGAGCTGAAGAAGCAGCGGCGCGTGGTTTTGTAAAAGGTTATCGAAATTCTGGTAAGGGTGAACTTGATTTTAGAGGCTTTTACGGTAACGAGGATGAAGACGAAGACGAAGACGATGACGAAGAAGATGATGCGAGTTGTTCAAGTTCAGATTTGTTTGAGCTGGATCATCTTATTGGAGCTGCAAGGTACCAAGAAGAACTTCCTGTGTATGAAACTACCAATTTGGAAACAAATAAAGCCATTGCCAGTGGTCTATGTTTGTAG 1194 0.4623 MHTRQREKEKEKSMKESTCPQRRRTPSFSSSLLDAIYHSIDESKSNLHQDQPPSLFDHNPQSFTFEKSGKKERMNLRRAVMLEDWMEKHTSHSRSHSQTSHFLNYSSSSSECSSGGIFSSSETDTTTFKKHRPRPASEKKKQDHRVSEKQNKEGGFARTKLRALKIYGELNQRVKQPISPGSRIASFLSSIFNSQNVKKAKMCYVGAVEDVSFEHKSKSPCFSSTPSSFSRRSCMSKTPSSAKKSNTNGVKRSVRFYPVSVILGEDSEPQPSYHKCSNIYESEPNFTVRKITRSSSIKELKNGVRGEENGAEEAAARGFVKGYRNSGKGELDFRGFYGNEDEDEDEDDDEEDDASCSSSDLFELDHLIGAARYQEELPVYETTNLETNKAIASGLCL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g05410 397 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 9 396 IPR039621 GO:0009734
Viun3g05410 397 MobiDBLite consensus disorder prediction 46 63 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 337 358 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 116 155 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 332 358 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 1 30 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 42 72 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 1 19 - -
Viun3g05410 397 MobiDBLite consensus disorder prediction 139 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g05410 Viun-Chr3 60230610 60232399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g05410 - - gmx:100803228 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05410 3 60230610 60232399 Viun10g02438 10 38566277 38568062 ECH
Viun3g05410 3 60230610 60232399 Viun9g03257 9 39503860 39505637 ECH
Viun3g05410 3 60230610 60232399 Viun8g00582 8 4233984 4235120 ECH
Viun3g05410 3 60230610 60232399 Viun3g05410 3 60230610 60232399 ECH