Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02438 ATGGACAAGTGGGACAATAAACCATCAAGAAAACAGCACCAGAGAGAAAACCCTTCTTTCTCTTCCACTCTACTTGACGTTATCTACCGTTCCATCGACGAAGATCAAACGGAGGAGAAGGAGGAGGAGGAGCTCATCTTTTACCGGGAAACCATGAGGAAGCAGAAACAGAGCAATTGTTTCAGAGAGGAGAAAGCTGAAGCTGAGAAACTCAACTCTCGCAGGGCCAGGAAGGTGGAGAGTTGGATGGAGAAGAGAAGCTCCGAGAAAGTTCTAATGGGGAGAAACTCGTTGACGGAATTCGAAAGAAGAACGCGAAGCAATTCAATTTCGAACACTCTCTCCATGTATTCAAGTTCAACCTCTTCCTCTGAGTCAAGCTCTGTTGGGGGCTTCTCTTCTTCGGAGTCAGAGTCCTTCTATGGAGTGCAGAGGCCAAAGCCAATCAAAACCAGTGTTTCTGATAAAACCAAAACCAAAACCAAAACCAACTTCGACGCCGCACTTCACAATCACAGCTTCCGGAGCCACTCTTCTCAAACCCAGAAGCCAAAGCACGAGAATGGTTTCGGCAAAACCAAGTCCAAAGCCTTGAAAATCCTTTACGGCGAGTTGAAGAAAGCAAAGCAACCCATTTCACCGGGTGCAAAACTCGCTAGCTTTCTCAACTCTCTCTTCACTTCAAGTGGGAATGCCAAGAAAGCAAAGGTTTCAACAACTACGACATCATGTCGTCCCGTTCCGATTTCGGTCACAACAAATCGTGCAACTGATTCTAAACCAGCGGCACAACAGCCAGGCTCTACGTGTTCATCAGCATCTTCTTTTTCAAGGTCTTGTTTGAGCAAAACCCCTTCTTCAAGATCAGGCGCAAAAAGGTCTGTGAGGTTTTGCCCAGTGAGTGTTGTGGTAGATGAAGATTGTAGGCCATGTGGGCACAAGAATGTTTACGAGGGTGAAGGAGATTTGGTGGCTTCCAATGGAAAGAACAGGAGTGAGGAACTGAGACTGCATGTCATGCAGGAGAGTCGCAGGGTGGAGGAGTTAGCGAGAGACTTGCTGAAGAATTATCAGAAAAAGAACGAAGTGGAGTTTGATGCTGTTATGCATTATGCAGATGAAGATGAAGAAGAAGATGATGATGATGATGTAGCCAGTTGTTCAAGTTCTGATCTTTTTGAGTTGGATAATCTATCAGCAATTGGGATTGAGAGGTACAGGGAAGAGTTACCTGTGTATGAAACTACCCATTTCAGTACCAATAGAGCCATTGCCAATGGCTTCATTCTGTAA 1293 0.4548 MDKWDNKPSRKQHQRENPSFSSTLLDVIYRSIDEDQTEEKEEEELIFYRETMRKQKQSNCFREEKAEAEKLNSRRARKVESWMEKRSSEKVLMGRNSLTEFERRTRSNSISNTLSMYSSSTSSSESSSVGGFSSSESESFYGVQRPKPIKTSVSDKTKTKTKTNFDAALHNHSFRSHSSQTQKPKHENGFGKTKSKALKILYGELKKAKQPISPGAKLASFLNSLFTSSGNAKKAKVSTTTTSCRPVPISVTTNRATDSKPAAQQPGSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVVVDEDCRPCGHKNVYEGEGDLVASNGKNRSEELRLHVMQESRRVEELARDLLKNYQKKNEVEFDAVMHYADEDEEEDDDDDVASCSSSDLFELDNLSAIGIERYREELPVYETTHFSTNRAIANGFIL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02438 430 MobiDBLite consensus disorder prediction 166 186 - -
Viun10g02438 430 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 9 430 IPR039621 GO:0009734
Viun10g02438 430 MobiDBLite consensus disorder prediction 1 22 - -
Viun10g02438 430 MobiDBLite consensus disorder prediction 151 165 - -
Viun10g02438 430 MobiDBLite consensus disorder prediction 236 291 - -
Viun10g02438 430 MobiDBLite consensus disorder prediction 57 192 - -
Viun10g02438 430 MobiDBLite consensus disorder prediction 57 102 - -
Viun10g02438 430 MobiDBLite consensus disorder prediction 103 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02438 Viun-Chr10 38566277 38568062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02438 - - gmx:100798956 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g05410 3 60230610 60232399 Viun10g02438 10 38566277 38568062 ECH
Viun9g03257 9 39503860 39505637 Viun10g02438 10 38566277 38568062 ECH
Viun10g02438 10 38566277 38568062 Viun10g02438 10 38566277 38568062 ECH
Viun10g02438 10 38566277 38568062 Viun9g03257 9 39503860 39505637 ECH
Viun10g02438 10 38566277 38568062 Viun8g00582 8 4233984 4235120 ECH