Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04825 ATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGCCAGCACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCCAAGTATGGGGGACCTGACCCTTCGACCTACAGATACAACAGGACTGAAGCTTTGGCAGGGGACTGGTTCTGCAACTGTGGAGGTCACAACTATGCCAGTCGATTAAACTGCTACAGATGTGGTGCAATGAAAGATGATTATTCTTCAGGATATGCCAACAACTCTGGAGGTTATGGATCTGACACTTTCCCCCCAGGATGGAAGACTGGAGACTGGCTTTGCCCAAGACTTGGATGTGGAGTGCACAATTATGCCAGCAGGACAGAATGTTATAAATGCAAAATGCAAAGGGATTTTGGTGAGAAAAGTGGTGCAGATTGA 411 0.4696 MSWSGGDWMCGVCQHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFCNCGGHNYASRLNCYRCGAMKDDYSSGYANNSGGYGSDTFPPGWKTGDWLCPRLGCGVHNYASRTECYKCKMQRDFGEKSGAD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04825 136 Gene3D - 93 128 - -
Viun3g04825 136 Gene3D - 1 35 - -
Viun3g04825 136 Gene3D - 42 76 - -
Viun3g04825 136 ProSiteProfiles Zinc finger RanBP2 type profile. 98 129 IPR001876 -
Viun3g04825 136 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Viun3g04825 136 SUPERFAMILY Ran binding protein zinc finger-like 92 129 IPR036443 -
Viun3g04825 136 SUPERFAMILY Ran binding protein zinc finger-like 46 76 IPR036443 -
Viun3g04825 136 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Viun3g04825 136 SMART zf_4 100 126 IPR001876 -
Viun3g04825 136 SMART zf_4 6 30 IPR001876 -
Viun3g04825 136 SMART zf_4 50 73 IPR001876 -
Viun3g04825 136 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Viun3g04825 136 ProSitePatterns Zinc finger RanBP2-type signature. 102 123 IPR001876 -
Viun3g04825 136 Pfam Zn-finger in Ran binding protein and others 98 124 IPR001876 -
Viun3g04825 136 Pfam Zn-finger in Ran binding protein and others 6 32 IPR001876 -
Viun3g04825 136 PANTHER ZINC FINGER PROTEIN 43 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04825 Viun-Chr3 55526132 55527901 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04825 - - gmx:100780120 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04825 3 55526132 55527901 Viun9g00890 9 6792102 6793878 PCT