Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04740 ATGAGTCTCATGAACTCTCCCACACGGGTGACGGTTGGTGATGCTAATTACATGGACTGGACTGGCGTTAACAACCACTACAGAACTGCTTACAAAGCGGATGACCAAAAGTCCGTGATGGATGTGGCACTCATTTCAAACATGGATCCTGTAAATATTGGGCTGGCTTGTTCAGATAAGCCAGGTCCCGTTACTTCCCTGAAGCCCAGAAAGAAAACAATGACATCAGTGTATTTGAAGTTCTTTGAGACAGCTGTTGATGGCAAGACTCGCAGATGCAAGTTTTGTGGACAGAGCTATTCCATTGCAACTGCCACAGGCAATTTGGGAAGGCATCTTGCTAATCGCCATCCAGGTTACGACAAGTCGGGGGACGCTGTCAGCAATTCAGCTGCAAGGACTATCACTGTGGTGAAGAAGTCACAGCCTCAAGGAAAAGCAAACCAGGTGGATTATGATCATCTAAATTGGTTGCTCGTTAGGTGGCTTGTTCTAGCTGCTCTCCCTCCTTCAATTCTAGAAGAGAAGTGGCTTGTGAATTCCTACAAGTTTTTGAATCCTTCCATACATCTCTGGCCAAGTGACAAGTATAGAACTGTACTTGATGAAGTCTTCAGAAGCATGAGGGAAGATGTAAGGGCATTGTTGGAACAGGTTTCTTCGAAGTTGTCCATTACACTTGATTTCTGGACCTCCTTTGAACAGATTTACTATATGAGTGTGACATGTCAATGGATCGACGAAAACTGGTGCTTCCAGAAGTTGCTTCTTGATATCTGTCGAATACCCTATCCATGTGGGAGTACAGAGATATATCGTTCCCTCGTAAAAGTTCTCAAATTTTACAATATTGAAACCAGAATTCTGTCCTGTACCCACGATAATAGTACAAGTGCCATGCATGCTTGCCATACTTTGAAAGAGGACTTAGATGGCCAGAAAATAGGGCCTTTTTGTTATATTCCCTGTGCTGCTCGAACTTTGAATGTGATAATAGATGATGGATTGAGATCTGCAAAACAAGTAATTTCTAAGATACGGGAGTTTGTAATAGAGTTAAATGCCTCACCAGTGATCTCTGAGGATTTTATTCAAATATCCACTGCTTATCAAGAAGGCATTTGGAAATTTCCTCTTGATATTTCAGCAAGGTGGAGTGGAAACTATCAAATGCTTGATCTTGTTCGAAAGGCAGGTAAATCAGTGGATGCTGTTATTCGAAAATACGAAGAAATGCTAGGCAGTAGGATGCTGCTGGGATCTTCTGACAAAAGTGTGGTTAGCATCATGCATCAATATCTTGAACCATTCTACAAAACCACAAACAACATCTGCACAAGTAAGGTGCCAACGGTTGGGCTTGTGCTTTTCTTCATGGATCACATATCAGAAACCATTAATTCCTGCAGAGAATCGCGTCACAGCCCAGAATGGCTAAAAAATGCTGCAGAAGAAATGGCTAAAAAGGCCAGAAACTACATCCATCAGGTTTGCAACATATTTACTTACATGACAGCAATTCTAGATCCTCGAATAAAGGGAGAGCTGATCCCTGATAGTTTAAACTCGGAAACCTTTTTGGACGAAGCGAGATCCCATTTTATAAGAAATTATTCTACCAGCCATTTCTCATCCATGAGTTCTGGATACAATGCTCAAGAGATTGAAGAAGGAGGAAGTGTTTCCTTTGCAGAGGAAATTGCACGGAAGAAGCGAAGGACAACCATGAGCTCTGCTACTGATGAGCTTACACAGTACCTATCAGAGGCTCCAGCTCCAATACCAACAGATGTTCTAGAGTGGTGGAAGGTCAACAGTACACGCTACCCTCGACTATCTGTTATGGCTAGAGATTTCCTGGCTGTGCAGGCAACTTCAGTTGTGCCTGAAGAACTTTTCTGTGGCAAGGGTGATGAAATTGACAAACAACGAATCTGTATGCCACATGACAGCACACAGGCCATTCTTTGTATCAAGTCATGGATTCAGGTTGGCGTCAAGTTTAAGTTTAAATCAACTGAGATAGATTATGAGCGGTTGATGGAATTGGCAGCTGCAGCCGCTGCAACAGATAATAGTCCTGCAAGTTCTGATAAGAAGCCAAAATAG 2109 0.4263 MSLMNSPTRVTVGDANYMDWTGVNNHYRTAYKADDQKSVMDVALISNMDPVNIGLACSDKPGPVTSLKPRKKTMTSVYLKFFETAVDGKTRRCKFCGQSYSIATATGNLGRHLANRHPGYDKSGDAVSNSAARTITVVKKSQPQGKANQVDYDHLNWLLVRWLVLAALPPSILEEKWLVNSYKFLNPSIHLWPSDKYRTVLDEVFRSMREDVRALLEQVSSKLSITLDFWTSFEQIYYMSVTCQWIDENWCFQKLLLDICRIPYPCGSTEIYRSLVKVLKFYNIETRILSCTHDNSTSAMHACHTLKEDLDGQKIGPFCYIPCAARTLNVIIDDGLRSAKQVISKIREFVIELNASPVISEDFIQISTAYQEGIWKFPLDISARWSGNYQMLDLVRKAGKSVDAVIRKYEEMLGSRMLLGSSDKSVVSIMHQYLEPFYKTTNNICTSKVPTVGLVLFFMDHISETINSCRESRHSPEWLKNAAEEMAKKARNYIHQVCNIFTYMTAILDPRIKGELIPDSLNSETFLDEARSHFIRNYSTSHFSSMSSGYNAQEIEEGGSVSFAEEIARKKRRTTMSSATDELTQYLSEAPAPIPTDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRICMPHDSTQAILCIKSWIQVGVKFKFKSTEIDYERLMELAAAAAATDNSPASSDKKPK 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04740 702 Pfam Domain of unknown function (DUF4413) 445 525 IPR025525 GO:0003677
Viun3g04740 702 SUPERFAMILY Ribonuclease H-like 209 664 IPR012337 -
Viun3g04740 702 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 39 655 - -
Viun3g04740 702 Pfam hAT family C-terminal dimerisation region 582 662 IPR008906 GO:0046983
Viun3g04740 702 SMART bed5 73 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04740 Viun-Chr3 54807841 54812183 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04740 - - ahf:112708868 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04740 3 54807841 54812183 Viun3g04740 3 54807841 54812183 ECH
Viun3g04740 3 54807841 54812183 Viun9g00778 9 5788362 5792528 PCT