Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04197 ATGGAACATCATAAACCATTGTTACCTACTTCCTCTCACGCCGCTCCAACCCCAACCACTCGCAAGGACCTTCTTCTCGTCGTTTTCGGCTTGCTCTTCCTCTCTTCCCTCGTCGCTTATGGGGGTTACAGGGCCTCCAACGTGCCTCATGCTCACGTTTCATCGCCTGCATCCAACCATCAACAAGAACACCAAAGTCCCACATCGCTGCCTTCTTCTAAATGGTACCCTGTTTCAAGGGGTGTTTCTTCCGGCGTGTCGGAGAAGTCATTGAACTTGTTATTCGCCGGTGAAGGAGGAGCTTCCGAAGCATTTCCTTGGGACAATAGCATGCTGTCTTGGCAGAGAACTTCTTTTCATTTCCAGCCAGAGAAAAACTGGATGAACGATCCGAATGGTCCTATGTACTACAAGGGATGGTATCACTTTTTCTACCAATACAATCCGAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCGGTGTCAAGGGACATGATCCATTGGCTTCACCTTCCATTAGCAATGGTGGCTGATCAATGGTATGACAAACAAGGCGTGTGGACAGGCTCAGCCACCATCTTACCAAATGGTGAAATCATCATGTTATACACAGGTTCCACCAACGAGTCAGTGCAAGTTCAAAACCTTGCATACCCTGCTGACCCCTCTGACCCTCTGCTTCTGGATTGGATCAAACACCCCGAGAACCCAGTTTTGGTCCCACCACCAGGAATTGGTGCCAAGGACTTTCGTGACCCTACAACTGCATGGCTCACCTCTGAAGGAAAGTGGCGCATAACCATAGGATCCAAGCTTAATAAAACTGGCGTTGCTTTGGTTTATGACACTGAGGATTTCAAGACCTATGAGCTTAAGGAGGGGTTGCTTCGAGCTGTCCCTGGCACTGGCATGTGGGAGTGTGTGGACTTCTTCCCTGTGTCCAAGAAAAATGGAAATGGATTGGATACCTCTGTTAATGGGGCTGAGGTCAAGCATGTCATGAAGGTCAGCCTGGATGATGATAGACATGATTACTACGCCATTGGGACTTACGATGAAAACAAAGTTTTGTTCACACCAGATGATGTTAAGAATGATGTTGGAGTTGGTTTAAGGTATGACTATGGAATATTCTATGCATCCAAGACATTTTATGATCAGCACAAGGATAGGAGAATTTTGTGGGGTTGGATTGGAGAATCTGACAGTGAATATGCAGATGTCACCAAAGGTTGGGCTTCAGTTCAGAGTATTCCAAGAACTGTGAGTCTTGATACGAAGACTGGCAGCAACTTACTTCAGTGGCCTGTTGCTGAGGTGGAGAGTTTGAGATTGAGAAGTGATGAATTCAAAAGTTTGAAGGCTAAACCAGGGTCAGTGGTGTCACTAGATGTTGAAACAGCCACACAGTTGGACGTTGTTGCGGAGTTTGAGATAGACAAGGAATCCCTAGAGAAAACAGGTGAATCCAATGAGGAGTTCACATGCAGCAGCAGTGGTGGAGCTGCACAACGTGGTGCCTTGGGACCTTTTGGTCTTCTGGTTTTGGCTGATCAGGGGCTTTCTGAGTATACTCCGGTGTATTTCTATGTCATTAAAGGAAGAAATGGAAATCTTAGGACTTCATTTTGCTCTGATCAATCAAGGTCTTCTCAGGCAAATGATGTTCGCAAGCAAATACTTGGGAGCGTTGTTCCAGTACTTAAAGGCGAAAAGTTTTCCTTACGGATGCTGGTGGACCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGAACGTGTGTGACATCTAGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGAATATTCTTGTTCAACAATGCTACTGAGGCCACTGTGACAGCCTCACTCAAAGTTTGGCAAATGAATTCTGCGTTTATACGGCCATTCCCATTCGACCCAGATCAGAAGAGCTAA 1950 0.4631 MEHHKPLLPTSSHAAPTPTTRKDLLLVVFGLLFLSSLVAYGGYRASNVPHAHVSSPASNHQQEHQSPTSLPSSKWYPVSRGVSSGVSEKSLNLLFAGEGGASEAFPWDNSMLSWQRTSFHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDKQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLLDWIKHPENPVLVPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGVALVYDTEDFKTYELKEGLLRAVPGTGMWECVDFFPVSKKNGNGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDENKVLFTPDDVKNDVGVGLRYDYGIFYASKTFYDQHKDRRILWGWIGESDSEYADVTKGWASVQSIPRTVSLDTKTGSNLLQWPVAEVESLRLRSDEFKSLKAKPGSVVSLDVETATQLDVVAEFEIDKESLEKTGESNEEFTCSSSGGAAQRGALGPFGLLVLADQGLSEYTPVYFYVIKGRNGNLRTSFCSDQSRSSQANDVRKQILGSVVPVLKGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARIFLFNNATEATVTASLKVWQMNSAFIRPFPFDPDQKS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04197 649 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 450 633 - -
Viun3g04197 649 Pfam Beta-fructofuranosidase, N-terminal domain 4 112 IPR021792 GO:0004564
Viun3g04197 649 CDD GH32_Fruct1-like 126 426 - -
Viun3g04197 649 Gene3D - 450 633 - -
Viun3g04197 649 Pfam Glycosyl hydrolases family 32 N-terminal domain 120 438 IPR013148 -
Viun3g04197 649 SMART glyco_32 120 593 IPR001362 GO:0004553|GO:0005975
Viun3g04197 649 Pfam Glycosyl hydrolases family 32 C terminal 441 632 IPR013189 -
Viun3g04197 649 SUPERFAMILY Arabinanase/levansucrase/invertase 113 439 IPR023296 -
Viun3g04197 649 ProSitePatterns Glycosyl hydrolases family 32 active site. 120 133 IPR018053 GO:0004553|GO:0005975
Viun3g04197 649 MobiDBLite consensus disorder prediction 51 74 - -
Viun3g04197 649 Gene3D Glycosyl hydrolase domain; family 43 124 449 IPR023296 -
Viun3g04197 649 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 124 450 - -
Viun3g04197 649 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 109 636 - -
Viun3g04197 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 438 637 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04197 Viun-Chr3 49614055 49618220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g04197 22 641 Glycoside Hydrolase AT1G12240 66.614 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04197 K01193 - gmx:100788844 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04197 3 49614055 49618220 Viun3g04197 3 49614055 49618220 ECH
Viun2g02465 2 31194199 31198227 Viun3g04197 3 49614055 49618220 PCT