Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02465 ATGGAACGTTCCCTCTCCTCTCATTCTGAACTTCCCTGTTCCTATGTTCCTATACCCGACGGACCCTACTCTCCGGCGGAGCCTGACCCTCCAAGACACGTGGCGGCGAAAAAGGTGCTTCTCATCTCATCTGTGTTGCTGCTGCTGCTTCTGTCCTTGGTGGCCTTCAATGCCTACTACCCCCATTTTTCTGGAGACGGAGATCATGCTTCATTAGCACCAACAACGCCCAATGAATTGAAGTTCAGCCCTCACACCGTACCAAGCTCAATGTTGAAACCATTTTCACGTGGTGTGTCTTCAGGGGTGTCGGAGAAGTCTAATAACTGGATGTTGAAGAGCAGCAATGGAGAATCCTATCCTTGGAACAATAGCATGCTGTCGTGGCAGCGAACGGCTTATCACTTCCAACCTGAGAAGAATTGGATGAACGATCCTAATGGTCCTATGTACTACAAAGGGTGGTATCACTTCTTCTACCAATACAATCCGGAAGGTGCAGTTTGGGGTAGCATAGTTTGGGGGCATGCTGTATCAAGGGACTTGATTCACTGGCTTCACCTTCCACTTGCAATGGTGGCTGATCAATGGTATGACCAAAACGGTGTGTGGACTGGCTCTGCCACAATCTTACCTGATGGTCAAGTCATCATGCTATACACTGGTTCAACCAACGAGTCAGTGCAGGTCCAAAACCTTGCATACCCTGCAGATCCCTCTGATCCTCTCCTTGTTGATTGGATCAAATACCCTTCAAATCCAGTTCTGTTCCCTCCACCAGGCATCGACACCAAGGATTTTCGAGACCCCACCACAGCTTGGCTCACCTCAGAAGGCAAGTGGCGCATCAGTATTGGATCAAAGCTTAACAAAACTGGCATAGCCTTGCTTTATGATACCAATGACTTCAAAACCTATGAGCGTGTGGAGGGACTGCTCCGTGCTGTGCCTGGCACTGGCATGTGGGAGTGTGTTGATTTCTTCCCAGTATCCAGTGAGGGTGAAAATGGCTTGGATGCTTCAATCAATGGGGAGAATGTGAAGCATGTGGTGAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCAGTGGGGACTTACGATGAGAAGAATGCCAAGTTCACACCAGATGACTTGAACAACGATGTTGGTATTGGACTCAGATATGACTACGGTATATTCTATGCATCCAAGACATTTTATGATGAGAGTAAGGGGAGGAGAGTGTTGTGGAGTTGGATTGGAGAGTCTGATAGCGAATATGCTGACGTAGCCAAAGGTTGGGCATCAATTCAGGGTATTCCAAGAACAGTGACACTTGATAAGAAAACTGGTAGCAGCTTACTTCAATGGCCTGTAGCAGAGGTGGAAAGTTTGAGATTGGGAAGCAATGAGTTTGAAAATTTGAAGGTGAAGCCAGGGTCAGTGGTGCCACTTGAAATTGGAACAGCTGCACAGTTGGACATTATAGCTGAGTTTGAGATAGATAACAAATCCTTGGAGATGACTGCACAATCCAATAAAGAGTACGAGTGTAGCACCAGTGGTGGAGCAGCAGAACGTGGTGCCTTAGGACCATTTGGTCTTCTAGTTTTGGCTGATGATGATCTTTCTGAATACACTCCCACGTACTTTTATGTAGTTAAAGGAAGCGATGGACAACTTAAAACTTCCTTTTGCTCTGATCAATTAAGGTCTTCTCTAGCAACTGATGTTGGTAAGAAAATCTTTGGAAGCTCTGTTACAGTACTAGGAGATGAAAAATTGTCAGTGAGGATATTGGTGGACCATTCTGTGGTGGAAAGCTTTGCTCAAGGTGGAAGAACATGCGTTACATCTCGAGTTTATCCAACGAAAGCAATCTATGGAGCTGCTAGATTGTTTTTATTCAATAATGCTACCGAAGCCACTGTGACTGCTTCAGTTAAAGTTTGGCAAATGAATTCTGCATTCATACGCCCCTTCAACCCACAAGAAAGTAATTCAATTTAA 1995 0.4551 MERSLSSHSELPCSYVPIPDGPYSPAEPDPPRHVAAKKVLLISSVLLLLLLSLVAFNAYYPHFSGDGDHASLAPTTPNELKFSPHTVPSSMLKPFSRGVSSGVSEKSNNWMLKSSNGESYPWNNSMLSWQRTAYHFQPEKNWMNDPNGPMYYKGWYHFFYQYNPEGAVWGSIVWGHAVSRDLIHWLHLPLAMVADQWYDQNGVWTGSATILPDGQVIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPSNPVLFPPPGIDTKDFRDPTTAWLTSEGKWRISIGSKLNKTGIALLYDTNDFKTYERVEGLLRAVPGTGMWECVDFFPVSSEGENGLDASINGENVKHVVKVSLDDDRHDYYAVGTYDEKNAKFTPDDLNNDVGIGLRYDYGIFYASKTFYDESKGRRVLWSWIGESDSEYADVAKGWASIQGIPRTVTLDKKTGSSLLQWPVAEVESLRLGSNEFENLKVKPGSVVPLEIGTAAQLDIIAEFEIDNKSLEMTAQSNKEYECSTSGGAAERGALGPFGLLVLADDDLSEYTPTYFYVVKGSDGQLKTSFCSDQLRSSLATDVGKKIFGSSVTVLGDEKLSVRILVDHSVVESFAQGGRTCVTSRVYPTKAIYGAARLFLFNNATEATVTASVKVWQMNSAFIRPFNPQESNSI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02465 664 Pfam Glycosyl hydrolases family 32 C terminal 456 647 IPR013189 -
Viun2g02465 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 453 652 IPR013320 -
Viun2g02465 664 Gene3D - 465 648 - -
Viun2g02465 664 Pfam Glycosyl hydrolases family 32 N-terminal domain 135 453 IPR013148 -
Viun2g02465 664 ProSitePatterns Glycosyl hydrolases family 32 active site. 135 148 IPR018053 GO:0004553|GO:0005975
Viun2g02465 664 SMART glyco_32 135 608 IPR001362 GO:0004553|GO:0005975
Viun2g02465 664 SUPERFAMILY Arabinanase/levansucrase/invertase 128 454 IPR023296 -
Viun2g02465 664 Gene3D Glycosyl hydrolase domain; family 43 139 464 IPR023296 -
Viun2g02465 664 Pfam Beta-fructofuranosidase, N-terminal domain 14 127 IPR021792 GO:0004564
Viun2g02465 664 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 139 465 - -
Viun2g02465 664 CDD GH32_Fruct1-like 141 441 - -
Viun2g02465 664 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 465 648 - -
Viun2g02465 664 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 124 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02465 Viun-Chr2 31194199 31198227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02465 5 664 Glycoside Hydrolase AT1G12240 62.054 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02465 K01193 - gmx:100798772 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02465 2 31194199 31198227 Viun2g02465 2 31194199 31198227 ECH
Viun2g02465 2 31194199 31198227 Viun3g04197 3 49614055 49618220 PCT