Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04192 ATGTCTAATAATAATCAGTCTTCCTCGCTGTTCTGGTTGTTGATAGCTGCTGTTGCTGCAATGTTTCGTTGTACTGCAAACATTATCTCGTCATTCAGAGAGAGCAAGTCGGACGATAGACGGTTCTATATATTCACAGCAACAAAAACTCTCCATCTAAGAACTGATTCAAGGAAGGACCGTGTGGCGTGGATTCAAGCTTTGGTTTCAACCCGAGAATTATATCCACTTCGACCACTCAGCGACCATCTCTCCCTCGCACCGAATCATATATCTGTATCAACCGAAAGGCTTAAGAAACGCTTACTTGAAGAGGGTAGCAGTGAGAGCCTTGTCAAAGAGTGCGAGCAAATTATGTTTGCCGAGTTCTCTGAACTACAAGAGCAACTTCATATACTATGTCAAGAACGAAGGAATTTGCTTGATACAATAAGGCAGCTGGAGGCTGCTAATATTGAACCTGAGGCCTCTGCCTTGCATGACAGTGAATACCAATTAACGAAGAATGGATTTTCAAGTTTAGGACATGGAAAATATAGCGAATGCAGTACCACTGAATCATCGGATGATATTGAGAAACAGGAGATGGAGGAAGTGTCAGATGAAGATGAAATCTCATATTATGACACTAAAGAGTATTTTACAGAACTTAGTTTTAGGTGTGGGTCCACAGGAGCTTTGGATCCAATGAGCAGGTCTGGGTCCATTGATTTGGAGAACAGTCATGTTCGGGAGACGGTCAATGATTTTGGGTACCCTCAGATAGCAAGGCGAAAGAAGCTTCCAGATCCTGTTGAGAAGGAAAAGGGCGTTAGTCTTTGGTCAATTATCAAAGACAACGTGGGCAAAGATCTCACACGAGTGTGTCTTCCTGTATACTTTAATGAGCCAATTTCATCTCTTCAGAAATGTTTTGAGGACTTGGAGTACTCCTTTCTTCTGGATAGAGCTTATGAGTACGGAAAAGCGGGAAACGGTCTCCTTCGGGCTTTGCATGTTGCTGCCTTTGCTGTTTCTGGATATGCATCATCCGAAGGTCGTCATTGTAAACCCTTTAATCCATTGTTAGGGGAAACTTATGAAGCTGATTATCCTGACAAAGGAGTTCGTTTCTTTTCGGAAAAGGTGAGTCACCATCCAACTGTAGTTGCCTGCCACTGTCAAGGTAGAGGATGGAAGTTTTGGGCAGACAGTAACATTCGGTCAAAATTTTGGGGAAGGTCAATTCAGCTTGACCCAGTGGGTGTTCTGACCCTGGAGTTTGATGACGGTGAAATATTTCAGTGGAGCAAGGTCACGACAACAATTTATAATCTCATCCTTGGGAAAATATATTGCGATCATCATGGAAACATGGACATCCGTGGCAATCGCCAATATTCGTGCAGACTTAAGTTCAAAGAACAGGCGATTCTTGATCGAAATCCTCACCAGGTGCATGGCTTTGTTGAAGATGTAACGGGAAAAAAGGTTGCTACATTGTTTGGCAAGTGGGATGACAGCATGTATTATGTTAACGGTGAAGCGAATGTGAAGCCAAAAGATTCCACTTTGTCAGAGGCAAACTTGTTGTGGAAAAGGACTAAGCCACCTTCTAATCTCACCCGGTACAATCTGACATCATTTGCAATCACACTGAATGAGCTTACTCCTGGGCTAAAGGAGAAGCTTCCACCCACGGATTCCAGGCTGAGACCAGATCAGCGGCATCTAGAGGATGGGGAATACGAGAAGGCTAATATTGAAAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGATGGCAACCTAGGTGGTTCCGCAGAGAAGGTGAAAACGGTACGTTTCGATATATTGGCGGGTATTGGGAAGCGAGAGCTCTAGGAAGATGGAACGAATGCCCAAATATCTTTGGTGATGTTTATGAAGGAAATTTTGATCCTTTAGGTGCATCTTGA 1956 0.4325 MSNNNQSSSLFWLLIAAVAAMFRCTANIISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRELYPLRPLSDHLSLAPNHISVSTERLKKRLLEEGSSESLVKECEQIMFAEFSELQEQLHILCQERRNLLDTIRQLEAANIEPEASALHDSEYQLTKNGFSSLGHGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTKEYFTELSFRCGSTGALDPMSRSGSIDLENSHVRETVNDFGYPQIARRKKLPDPVEKEKGVSLWSIIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSFLLDRAYEYGKAGNGLLRALHVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPDKGVRFFSEKVSHHPTVVACHCQGRGWKFWADSNIRSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDIRGNRQYSCRLKFKEQAILDRNPHQVHGFVEDVTGKKVATLFGKWDDSMYYVNGEANVKPKDSTLSEANLLWKRTKPPSNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLEDGEYEKANIEKQRLEKRQRMSRKMQENGWQPRWFRREGENGTFRYIGGYWEARALGRWNECPNIFGDVYEGNFDPLGAS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04192 651 Gene3D - 568 625 - -
Viun3g04192 651 Pfam Oxysterol-binding protein 272 625 IPR000648 GO:0008289
Viun3g04192 651 FunFam Oxysterol-binding protein-related protein 2A 568 639 - -
Viun3g04192 651 SUPERFAMILY Oxysterol-binding protein-like 267 645 IPR037239 -
Viun3g04192 651 Gene3D - 16 73 IPR011993 -
Viun3g04192 651 FunFam oxysterol-binding protein-related protein 1D isoform X1 358 529 - -
Viun3g04192 651 SUPERFAMILY PH domain-like 23 75 - -
Viun3g04192 651 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 34 625 IPR000648 GO:0008289
Viun3g04192 651 Coils Coil 130 150 - -
Viun3g04192 651 ProSiteProfiles PH domain profile. 1 73 IPR001849 -
Viun3g04192 651 Gene3D - 358 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04192 Viun-Chr3 49514887 49522586 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04192 K20456 - gmx:100793692 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04192 3 49514887 49522586 Viun3g04192 3 49514887 49522586 ECH
Viun2g02445 2 31127410 31135828 Viun3g04192 3 49514887 49522586 PCT