Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02445 ATGCGAGTGAAAGAGATGCACCAACTGTGTTGTATCTCTCTGGAGAGTCCCGGAATCGGCAACCATTCCCCGGAGCGGATGGCGGCGAGACTTTTCCAAACGAGGAGTCTTCCTTTGGTGGGATCCCTCGGCAATGCTGCTCAAAGATGGGAGACCACGGTGGCCGGCGTTCTCTACAAGTGGACCAATTACGGCAAAGGCTGGAGATCCCGATGGTTCCTCCTCCGAAACGGTGTTCTCTCTTATGCCAAGATCCGCTGTCCGGAGAATCTCAACCTTCTCACTCCTCCGGACGACGTTCGCTTCATCGGGGAAATTTCCACCAACCGACTCGCACGAGTGGACAGAGTTGTCCCCGCCACACGAGGAAAACACCGCAAAGCTTCTTCCTCTTCCCGTGTAGTCCATCTCAAGAGTGGGTCACATCAACAGGTGGCCATGGAGGGTACGGTAGACTACGTCGTAGCCCTAGCAACGAAAACTCTCCATCTGAGAACTGATTCGAGGAACGACCGGGTAGCGTGGATACAGGCCTTGGTTTCGACACGTGGCCTATATCCTCATCAACCCCTCCATGATCATCTCTTGCTCACACCCAATGATATATCCGTGTCAACCGACAGGCTTAAGTCACGCTTGCTTGAAGAGGGTACCAGTGAGAACCTTGTAAAGGAGTGCGAACAAATCATGCTCTCAGAGTTCTCCGAAATGCAAGGACAATTTGAAGTTCTTTGTCAAGAGCGATCTAATCTGCTTGATACAATAAGGCAATTGGAGGCAGCTAATACTGAACCTGAAGCCACTGCAATACACGATGGTGATTACCAGTTAACAAAGAACGAGTTTTCAAGTCTTGGACGTGGAAAATATAGTGAATGTAGTACAACTGAATCATCTGATGATATTGAGAAACAAGAGATGGAGGAAGTATCAGATGAAGATGAAATCTCATATTATGATACTAGAGATTGTTTTACAGAGACTGATTGCAAGTGTGAGTCAGAAAGAGCTATAAATGAAGTGGACAGGTGTAGGGAAATCAGCACGCAATCCACTGATACAGAGAACATTCATCCTGAGAACATGGTCTGTAATTATAAGCATCCTCAGATTGCAAGACGAAAAAAGCTTCCAGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAGGACAACGTGGGAAAAGATCTCACGAGAGTTTGTCTCCCGGTATACTTTAATGAGCCTATATCATCCCTACAAAAATGTTGTGAGGACTTGGAGTACTCTTATCTTCTAGATCTAGCTCACGAATACGGAAAATCAGGAAACGGTCTTCTTCGGGCACTGTATGTTGCTGCCTTTGCAGTATCCGGTTATGCGTCATCTGAAGGTCGTAACTGTAAACCCTTTAATCCTTTATTGGGTGAAACCTACGAAGCTGATTACCCCGAGAAAGGAATTCGCTTCTTTTCAGAGAAGGTGAGTCATCATCCAACACTCATTGCCTGCCACTGCGAAGGTAGAGGTTGGAAGTTTTGGGCTGACAGCAACATCCATTCAAAGTTTCGGGGAAGGTCAATTCAGCTTGATCCAGTGGGTGTTCTGACCCTAGAGTTCAATGATGGTGAAATATTTCAGTGGAGCAAGGTCACCACCACGATCTATAATCTCATCCTTGGGAAAATATACTGTGATCATCATGGAGACATGGATATACGTGGCAATCGGAAGTATTCGTGCAGACTCAAGTTCAAAGAGCAGACGATACTGGACCGAAATCCTCGGCAAGTGCATGGATTTGTGGAAGATGTAACGGGGAAAAAAGTTGCGACATTGTTTGGGAAGTGGGATGACAGCATGTACTATATGAGTGGTAATGTAAATGTGAAGCCTAAAGATTTGAGTTCACCAAACGCAAACGCATCCTTGTTGTGGAAAAGGACGATGGCATCTCCTAATGTGAGCCGGTATAATTTGACACCATTTGCCATCACTCTCAATGAGCTTACTCCGGGACTCAAGGAGAACCTCCCGCCAACGGATTCCAGGCTTCGACCTGATCAACGCCATCTAGAGAATGGGGAATACGACAAGGCTAATTTCGAGAAACAAAGGCTGGAAAAGCGTCAGAGAATGAGATCAAAACAAGGAAATCAAGGAAAATACAAGAAAGTGGTTGGAAGCCCAGGTGGTTCCGAAGAGAAGGTGAAAGTGGAACCTTTCGATACATTGGTGGATATTGGGAAGCGAGAGAGCTTCGAAGCTGGGACGGTTGCCCTGATATATTTAGTGAAATCAACGAAGACTCTGCCGATCCTTAAGTGCATTTTAACTTGGTTCAGATAA 2340 0.4607 MRVKEMHQLCCISLESPGIGNHSPERMAARLFQTRSLPLVGSLGNAAQRWETTVAGVLYKWTNYGKGWRSRWFLLRNGVLSYAKIRCPENLNLLTPPDDVRFIGEISTNRLARVDRVVPATRGKHRKASSSSRVVHLKSGSHQQVAMEGTVDYVVALATKTLHLRTDSRNDRVAWIQALVSTRGLYPHQPLHDHLLLTPNDISVSTDRLKSRLLEEGTSENLVKECEQIMLSEFSEMQGQFEVLCQERSNLLDTIRQLEAANTEPEATAIHDGDYQLTKNEFSSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTRDCFTETDCKCESERAINEVDRCREISTQSTDTENIHPENMVCNYKHPQIARRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCCEDLEYSYLLDLAHEYGKSGNGLLRALYVAAFAVSGYASSEGRNCKPFNPLLGETYEADYPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNIHSKFRGRSIQLDPVGVLTLEFNDGEIFQWSKVTTTIYNLILGKIYCDHHGDMDIRGNRKYSCRLKFKEQTILDRNPRQVHGFVEDVTGKKVATLFGKWDDSMYYMSGNVNVKPKDLSSPNANASLLWKRTMASPNVSRYNLTPFAITLNELTPGLKENLPPTDSRLRPDQRHLENGEYDKANFEKQRLEKRQRMRSKQGNQGKYKKVVGSPGGSEEKVKVEPFDTLVDIGKRESFEAGTVALIYLVKSTKTLPILKCILTWFR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02445 779 MobiDBLite consensus disorder prediction 707 732 - -
Viun2g02445 779 Pfam Oxysterol-binding protein 388 720 IPR000648 GO:0008289
Viun2g02445 779 Gene3D - 474 639 - -
Viun2g02445 779 Pfam Pleckstrin homology domain 56 179 - -
Viun2g02445 779 MobiDBLite consensus disorder prediction 678 692 - -
Viun2g02445 779 SUPERFAMILY Oxysterol-binding protein-like 383 718 IPR037239 -
Viun2g02445 779 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 53 720 IPR000648 GO:0008289
Viun2g02445 779 ProSiteProfiles PH domain profile. 51 184 IPR001849 -
Viun2g02445 779 MobiDBLite consensus disorder prediction 671 692 - -
Viun2g02445 779 SMART PH_update 52 186 IPR001849 -
Viun2g02445 779 FunFam oxysterol-binding protein-related protein 1D isoform X1 474 647 - -
Viun2g02445 779 Gene3D - 48 184 IPR011993 -
Viun2g02445 779 SUPERFAMILY PH domain-like 53 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02445 Viun-Chr2 31127410 31135828 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02445 K20456 - gmx:100819924 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02445 2 31127410 31135828 Viun2g02445 2 31127410 31135828 ECH
Viun2g02445 2 31127410 31135828 Viun3g04192 3 49514887 49522586 PCT